Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq414 237 2e-57 seq507 129 8e-25 >seq414 Length=5667865 Score = 237 bits (262), Expect = 2e-57 Identities = 603/908 (66%), Gaps = 12/908 (1%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||||||||| || || | || || ||||| ||||| || | ||| ||| Sbjct 275300 TTTTGGTATTCACCAACTCGCCTCTCAAAGAAATTGGTCTTCCCCTGCAAACTTATGAGC 275241 Query 41834 TCCATGAAATCAAACGGATTG-GTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 41892 ||||| ||||||| ||||| || | || || | || ||| | ||||| | Sbjct 275240 TCCATCCAATCAAAAGGATTATGTGAG-TTGTACAACTTCTTATACCCCAAGGTGACCAG 275182 Query 41893 CAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 41952 |||| |||| || | || ||||| ||| |||||| || | |||||||| | ||| Sbjct 275181 CAATTTATCCGCCACAAACTCTATGTATTGGCTCATCAACTCTGAGTTCATTCCCAGAAG 275122 Query 41953 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 | || | || || || ||| ||| ||||||| || || || | | || Sbjct 275121 CCTGCAAGGTAACGCATCACAAACAAACTCTCTTTCAATATTCACTGCATCCGCCACAA- 275063 Query 42013 AGATCTT--ACTGTTTCTTCACTCGGTGGA--TACAATAAATGTTTAAACATCAAACATG 42068 | | | || |||||||||| || | || | | || | || || || | Sbjct 275062 -GCCCATGCACCTTTTCTTCACTAAGTTTCCCTCGAAGCA--GACTATAGATTAAGCAAG 275006 Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128 ||||||| || || ||||| ||||| | ||| | ||| ||||| || || | || | Sbjct 275005 CGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAG 274946 Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT-CCAGAAAAGAAGATT 42187 |||| | ||| | ||||| | ||| ||||||| |||| | | | || || || || || Sbjct 274945 GCATCAAGCCCCTTTTTTTCAACCAGAATATAG-CGCAGAAGCTTCCGGAGAAAAATATG 274887 Query 42188 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCCAC 42247 ||||| || |||||||| | || |||||| | || || | | ||||| Sbjct 274886 CCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAAGACTCAGAACCCTCGATCCAG 274827 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 | ||||||| |||||||||| ||||| || | ||||| || ||| ||||| Sbjct 274826 CGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAGAGC 274767 Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAA 42367 | | | || || | | ||| || | ||||| || | | ||||||||||| ||||| Sbjct 274766 TTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTATACATCTCTGAG 274707 Query 42368 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACT 42427 ||||| |||||||| || ||||| || || || || |||||||| | |||||| || Sbjct 274706 TGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACCTGGACC 274647 Query 42428 TCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAAC 42487 || | |||| |||| | ||| ||| || ||||| || || || || || Sbjct 274646 TCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCGAAGAAG 274587 Query 42488 GCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATA 42547 || | |||||||| || |||| || ||||| | ||| | ||||| | | || | Sbjct 274586 GCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGTGACGGAGA 274527 Query 42548 TCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATA 42607 |||| |||| ||| |||||||| |||||||||| || || |||||||| || ||||| Sbjct 274526 TCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTGTACATC 274467 Query 42608 TTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGG 42667 | |||||| ||| | || ||||||||||| || || | || || || || ||||| Sbjct 274466 TCCCAGATTTCAGGGTACTGAATTGGGAACATGCAGAAGCGATCAGGGTTGGGGGCAAGA 274407 Query 42668 ATCGGTTC 42675 | |||||| Sbjct 274406 AGCGGTTC 274399 Score = 212 bits (234), Expect = 8e-50 Identities = 598/909 (66%), Gaps = 12/909 (1%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| ||||| || || | ||||| ||||| ||||| || | ||| ||| | Sbjct 3473778 TTTTGGTACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGT 3473719 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| | || || || || |||| || | || || | |||||| || | | Sbjct 3473718 TCCATCCAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGTACCCCAATGCAACCAAC 3473659 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 |||||||| || | ||| ||||| ||| ||||| || |||||||||| | || Sbjct 3473658 AATCTATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGC 3473599 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 | || | || || || ||| || ||||||| || || || | | | Sbjct 3473598 CTGCACGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGA-- 3473541 Query 42014 GATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAAT-GTTTAAACATCAAACATGCG 42070 | | | || ||||||||||| | || ||| | || | | ||| || ||| Sbjct 3473540 GCCCGTGCACCGTTTCTTCACTAAGCTTC-ACTTTAAGCAGACTATAGAGCAAGCAAGCG 3473482 Query 42071 AAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 42130 || || || || | ||||||||| | ||| | || ||||| || || | |||||| Sbjct 3473481 AAGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGC 3473422 Query 42131 ATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT-CCAGAAAAGAAGATTCC 42189 || || || | |||||| | ||| ||||| | | || | | | || || || || || || Sbjct 3473421 ATCAGACCCCTCTTTTTCAACCAGAATATTG-CACAGAAGCTTCCCGAGAAAAATATACC 3473363 Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGT--CATGTATCCAC 42247 ||| || ||||| || | || |||||| | | || | | | ||| ||||| Sbjct 3473362 TTCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAA--CGACTCAGAACCATCGATCCAA 3473305 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 | |||||| |||||||| | |||||||| | ||||| || ||| ||||| Sbjct 3473304 CGAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGAGC 3473245 Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAA 42367 | | ||||| | | ||| || | || || || | | |||||||||||| || || Sbjct 3473244 CTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCAGAG 3473185 Query 42368 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACT 42427 || ||||||||||| || ||||| || ||||| || | ||||| | |||||| || Sbjct 3473184 TGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGGACC 3473125 Query 42428 TCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAAC 42487 || | || | |||| | ||||||| ||| || ||||| ||| || ||||| Sbjct 3473124 TCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGAAAAAA 3473065 Query 42488 GCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATA 42547 || | | |||||| || |||| |||||||| | || | | ||| | | || | Sbjct 3473064 GCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAGCGAGA 3473005 Query 42548 TCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATA 42607 |||| ||| | ||| || || || ||||||| || || |||||||| || || ||||| Sbjct 3473004 TCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATC 3472945 Query 42608 TTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGG 42667 | |||||| | | | || ||||||||||| || || | || || ||||| |||||| Sbjct 3472944 TCCCAGATTTGAGGGTACTGAATTGGGAACATGCAGAAGCGATCTGCGTTTGGGGCAAGG 3472885 Query 42668 ATCGGTTCC 42676 | |||||| Sbjct 3472884 AGGGGTTCC 3472876 >seq507 Length=3453940 Score = 129 bits (142), Expect = 8e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477 ||||| ||||| || | || |||||||| || |||||||||| | ||||| |||| | Sbjct 789709 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 789768 Query 72478 TACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACCGCGACACGCATTAA 72536 || || | || ||| ||||| ||||| | ||| || || || ||||| || | ||| | Sbjct 789769 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 789827 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 |||||| |||||||||||||| | || || || || | | |||||| ||||||| Sbjct 789828 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 789887 Query 72597 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 789888 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 789935 Score = 129 bits (142), Expect = 8e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477 ||||| ||||| || | || |||||||| || |||||||||| | ||||| |||| | Sbjct 791906 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 791847 Query 72478 TACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACCGCGACACGCATTAA 72536 || || | || ||| ||||| ||||| | ||| || || || ||||| || | ||| | Sbjct 791846 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 791788 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 |||||| |||||||||||||| | || || || || | | |||||| ||||||| Sbjct 791787 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 791728 Query 72597 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 791727 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 791680 Score = 107 bits (118), Expect = 3e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| ||| Sbjct 789399 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 789458 Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297 || |||| ||||| || || ||||||||||| ||||||| || ||| || || Sbjct 789459 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 789518 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 ||||| || || || || ||| || | || ||| || | |||||||| ||| Sbjct 789519 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 789578 Query 72358 CCCTCTATACTATCATCCATCATG 72381 ||||| |||||||| ||| ||||| Sbjct 789579 CCCTCAATACTATCTTCCTTCATG 789602 Score = 107 bits (118), Expect = 3e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| ||| Sbjct 792216 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 792157 Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297 || |||| ||||| || || ||||||||||| ||||||| || ||| || || Sbjct 792156 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 792097 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 ||||| || || || || ||| || | || ||| || | |||||||| ||| Sbjct 792096 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 792037 Query 72358 CCCTCTATACTATCATCCATCATG 72381 ||||| |||||||| ||| ||||| Sbjct 792036 CCCTCAATACTATCTTCCTTCATG 792013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671134854373680