Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq255 114 1e-20 seq482 113 4e-20 seq415 111 1e-19 seq3 105 6e-18 seq1 105 6e-18 seq317 93.3 4e-14 >seq255 Length=3424836 Score = 114 bits (126), Expect = 1e-20 Identities = 168/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | || ||| | ||| || || || ||||||||||| || || ||||| ||||| Sbjct 2252970 CCTCCCCTCAGCCTGAGCACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAGTCAGCG 2253029 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | ||| | |||||||||||||| ||| | | || | | |||||||||| || Sbjct 2253030 AGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGGGGG 2253089 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTT---GATAGACGCTATGGTATCGGTAGACTCC 48676 | | ||||||||| ||||| ||||| || | || ||||| |||| || | | Sbjct 2253090 ATTCCCTCCTTGTCCTGGATTTT-TGCTTTCACATTGTCG--ATGGTGTCGG-AGCTTTC 2253145 Query 48677 G-TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 | ||| | || |||||||| |||||||| || |||||||||||||||||| Sbjct 2253146 GACCTCCAAAGTGATGGTTTTCCCGGTGAGGGTCTTCACAAAAATCTGCATC 2253197 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||||||| |||||| || ||||| ||||| ||||| || | || || |||||| Sbjct 2253450 TGAAGTGTGGACTCCTTCTGGATGTTATAATCCGCCAAGGTACGACCATCTTCAAGCTGC 2253509 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || | |||| | | |||||| || || | | ||||||||| || || Sbjct 2253510 TTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTT 2253569 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | ||||| |||| |||| ||||| || ||||| || |||||| Sbjct 2253570 GCCTTGACATTGTCGATGGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTTCCGGTG 2253629 Query 48704 AGAGTTTTCACAAAAATCTGCATC 48727 ||||||||||| || ||||||||| Sbjct 2253630 AGAGTTTTCACGAAGATCTGCATC 2253653 >seq482 Length=739299 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581 ||| ||||| ||||| ||||| |||||||||| ||| || || | || || |||| Sbjct 127949 ATGCAGTGTAGATTCCTTCTGAATATTGTAATCAG-CAAGAGTACGTCCATCTTCAAGCT 128007 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| || | ||||| |||||||||||| || | | |||||||||| ||| | Sbjct 128008 GCTTCCCGGCGAAGATTAACCGCTGCTGATCCGGAGGGATCCCTTCCTTGTCCTGAATCT 128067 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | | ||||| || | |||||| ||| | || || || ||||| | Sbjct 128068 TGGCCTTGACATTGTCAATGGTGTCCGAGGACTCCACCTCCAGCGTAATCGTCTTACCCG 128127 Query 48702 TGAGAGTTTTCACAAAAATCTGCATC 48727 |||| || |||||||| ||||||||| Sbjct 128128 TGAGGGTCTTCACAAAGATCTGCATC 128153 >seq415 Length=3446356 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 ||||| || || |||||||||||||| |||||||| || ||||| ||| ||||||| Sbjct 2240322 ACTAAGTGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGCCAAGGTGCGCCCGTCCTCA 2240381 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| ||| | | || || | |||||||||| || | | ||||| ||| | Sbjct 2240382 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCCGGGGGGATTCCCTCCTTATCCTGA 2240441 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG-TCTCGACTGTTATGGTTTT 48696 || ||| ||| | | | || ||||| | || | || ||| | || |||||||| Sbjct 2240442 ATCTTCGCCTTCACATTGTCGATCGTATCCG-AGCTTTCGACCTCAAGGGTGATGGTTTT 2240500 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || |||||||| || ||||| |||||||| Sbjct 2240501 CCCTGTGAGAGTCTTGACAAAGATCTGCAT 2240530 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||| ||| || |||||||||||||||||||| | | | || ||||||||| Sbjct 2240100 TGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCCAAGGTCCTCCCATCTTCCAGCTGC 2240159 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || | || | | ||||||||| || | || ||||||||| ||| || Sbjct 2240160 TTCCCTGCGAAGATAAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGAATCTTG 2240219 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||| | | | || ||||| | |||| ||| | || || || || |||||| Sbjct 2240220 GCCTTCACATTGTCGATAGTATCAGAGCTCTCCACCTCCAAGGTGATCGTCTTTCCGGTG 2240279 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || |||||||| ||||||||||| Sbjct 2240280 AGCGTTTTCACGAAAATCTGCAT 2240302 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| || | ||| | || || ||||||||||| | | Sbjct 2240568 TCCTTCTGAATGTTGTAATCTGCGAGGGTGCGCCCATCTTCAAGCTGCTTACCTGCAAAG 2240627 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || || || |||||||| || | | ||||||||| |||||| ||||| Sbjct 2240628 ATCAACCGTTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGAATTTTGGCCTTGACGTTG 2240687 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 |||| ||||| | || ||| | || || || || |||||||||||||||||| Sbjct 2240688 TCTATTGTATCCGAGCTTTCAACCTCCAAGGTGATTGTCTTTCCGGTGAGAGTTTTCACA 2240747 Query 48716 AAAATCTGCATC 48727 |||||||||||| Sbjct 2240748 AAAATCTGCATC 2240759 >seq3 Length=5347415 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || || | || ||||| || || || || ||||||||||| || |||||||| |||||| Sbjct 3172364 CCACCTCTCAGCCTTAGGACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCC 3172423 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 ||| ||| |||||||||||||||| || | | || || | |||||| ||| || Sbjct 3172424 AATGTGCGCCCGTCCTCCAGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 3172483 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCG 48677 | | |||||| ||| |||||| ||| | | | || ||||| || | ||| Sbjct 3172484 ATGCCTTCCTTATCCTGAATTTTAGCCTTCACGTTGTCG--ATGGTGTCCGAGCTCTCTA 3172541 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || ||||| || || || ||||| || ||||| |||||||| Sbjct 3172542 CTTCGAGGGTAATGGTCTTGCCAGTTAGAGTCTTGACAAAGATCTGCAT 3172590 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC--GCTCGTCCTCCAGCT 48581 ||||| ||| |||||| || ||||||||||||||||| ||| || | || ||||||| Sbjct 3172160 TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAA-AGTCCTGC-CATCTTCCAGCT 3172217 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| || | || | | |||||| ||| || | | || |||||| ||| | Sbjct 3172218 GCTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCCTCTTTGTCCTGAATCT 3172277 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||| | ||||||| || | |||| ||| | || || ||||| || | Sbjct 3172278 TTGCCTTCACGTTGTCTATGGTGTCCGAGCTCTCCACCTCCAAGGTGATTGTTTTCCCAG 3172337 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 ||||||| ||||| || |||||||| Sbjct 3172338 TGAGAGTCTTCACGAAGATCTGCAT 3172362 >seq1 Length=8502017 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || || | || ||| | || || || || ||||||||||| || ||||||||||| ||| Sbjct 7226612 CCACCCCTCAGCCTGAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCTGCC 7226553 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | ||| ||||||| |||||||| ||| || | || || | ||||||||| || Sbjct 7226552 AGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAATCTCTGCTGATCTGGGGGG 7226493 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCG 48677 | | ||||| ||| |||||| ||| | | | || ||||| || | ||| Sbjct 7226492 ATGCCCTCCTTATCCTGGATTTTCGCCTTCACGTTGTCG--ATGGTGTCTGAGCTCTCGA 7226435 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || |||||||| |||||||| || |||||||| |||||||| Sbjct 7226434 CCTCTAGAGTGATGGTTTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 7226386 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||||||||||||||| || || | || | ||||| |||||||| ||| || | Sbjct 712118 TCCTTTTGAATGTTGTAGTCGGCGAGCGTCCGTCCATCCTCAAGCTGCTTCCCGGCGAAG 712177 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAG 48653 || || ||||||||||| || | | |||||||||| ||| || ||| | | | Sbjct 712178 ATCAACCGCTGCTGATCGGGAGGGATCCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTG 712237 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 || ||||| |||| ||||||| ||| | || || || || || || || ||||||| Sbjct 712238 TCG--ATGGTGTCGGAAGACTCCACCTCCAGCGTAATCGTCTTCCCCGTTAGGGTTTTCA 712295 Query 48714 CAAAAATCTGCATC 48727 | || ||||||||| Sbjct 712296 CGAAGATCTGCATC 712309 >seq317 Length=1979591 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| ||||||||||| || || | ||| | ||||| |||||||| ||| || | Sbjct 618287 TCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGCCCATCCTCAAGCTGCTTCCCGGCGAAT 618228 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAG 48653 || || || ||||||||| || | || |||||||||| ||| ||| ||| | | | Sbjct 618227 ATCAACCGTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGAATCTTCGCCTTCACGTTG 618168 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 || || || |||| ||||| ||| | || || || || || || || ||||||| Sbjct 618167 TCG--ATAGTGTCGGAGGACTCTACCTCTAGCGTAATCGTCTTCCCCGTAAGGGTTTTCA 618110 Query 48714 CAAAAATCTGCATC 48727 | || ||||||||| Sbjct 618109 CGAAGATCTGCATC 618096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248540588518