Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq414 111 8e-20 seq4 109 3e-19 seq245 104 1e-17 seq244 104 1e-17 seq213 104 1e-17 >seq414 Length=5667865 Score = 111 bits (122), Expect = 8e-20 Identities = 90/106 (85%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 11429 AAATATAGAAT-TAATAAAAAATCA-AAT--TGGCCCATGAAAGGATCGAACCTTCGACC 11484 ||||| | ||| ||| || |||| | ||| ||||||||| | | |||||||| ||||| Sbjct 1878637 AAATAAATAATATAAAAACAAATAAGAATACTGGCCCATGCAGGTCTCGAACCTGCGACC 1878578 Query 11485 TTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct 1878577 TTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCG 1878532 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 5249537 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 5249596 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 5249597 TGAGCTAATAGGCC 5249610 >seq4 Length=3848081 Score = 109 bits (120), Expect = 3e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 |||||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 3517243 AATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 3517302 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||||| |||| Sbjct 3517303 AACTGAGCTAATAGGCC 3517319 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2433521 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 2433462 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||| ||||| Sbjct 2433461 TGAGCTAATAGGCCG 2433447 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 3533921 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 3533980 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 3533981 TGAGCTAATAGGCC 3533994 >seq245 Length=37863 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 23341 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 23400 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 23401 TGAGCTAATAGGCC 23414 >seq244 Length=3405668 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2423946 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 2423887 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 2423886 TGAGCTAATAGGCC 2423873 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2494085 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 2494026 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 2494025 TGAGCTAATAGGCC 2494012 >seq213 Length=3704653 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 749025 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 748966 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 748965 TGAGCTAATAGGCC 748952 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261489549173368