Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq413 154 2e-33 seq415 145 1e-30 seq482 136 6e-28 seq403 114 2e-21 seq507 113 7e-21 >seq413 Length=2569514 Score = 154 bits (170), Expect = 2e-33 Identities = 195/268 (73%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||| | ||||||| ||| || ||||||||||| |||||||| ||||| ||||| Sbjct 2449337 CGCGAAGAGGCATCGCAAGGTTCTCCGGGATAACATCCAGGGAATCACGAAGCCGGCTAT 2449396 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||| | | || || || |||||| |||| || || | || || |||| Sbjct 2449397 CCGCCGTCTGGCAAGAAGAGGCGGCGTTAAGCGTATCTCCGGTCTGATTTACGAGGAGAC 2449456 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| |||| |||||||| ||| ||| |||| ||||| | ||| || || Sbjct 2449457 ACGTGGAGTTCTGAAAATCTTCCTGGAGAACGTCATCCGCGATGCGGTTACCTACACGGA 2449516 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||| | || || || ||| |||||||| |||| ||||| ||||| | || || Sbjct 2449517 GCACGCTCGGAGGAAAACAGTTACCGCCATGGATGTCGTTTATGCTCTGAAAAGGCAGGG 2449576 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | ||||| || || ||||| Sbjct 2449577 GCGTACTCTCTATGGGTTCGGCGGTTAA 2449604 >seq415 Length=3446356 Score = 145 bits (160), Expect = 1e-30 Identities = 176/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||| ||||| ||||| ||||| || || || ||||||||||||||||| || || Sbjct 1344731 GATAACATTCAAGGCATCACAAAGCCGGCGATTCGCCGTCTGGCTCGTCGTGGGGGTGTT 1344672 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || ||| || | || ||||||| || | ||| |||||||||| || || Sbjct 1344671 AAGCGTATCAGTGGTCTGATTTACGAAGAGACGCGCGGTGTCCTGAAGATCTTTCTGGAG 1344612 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | ||||||| || || || ||||| ||| || || |||||||| | Sbjct 1344611 AACGTCATTCGTGATGCTGTCACTTACACTGAGCATGCTCGCCGCAAAACTGTCACGGCA 1344552 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || || || | || | || || |||| | ||||||||||| ||||| Sbjct 1344551 ATGGATGTTGTTTACGCGCTCAAGAGACAGGGGCGTACTTTGTATGGTTTTGGTGGTTAA 1344492 >seq482 Length=739299 Score = 136 bits (150), Expect = 6e-28 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || |||||||| || || ||||| ||||| || || || || |||||||||||||| Sbjct 563530 CTCCGCGATAACATTCAGGGGATCACGAAGCCTGCGATTCGGCGGTTGGCTCGTCGTGGT 563589 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || |||||| || || || |||| || |||| ||||| ||| | ||||||||| Sbjct 563590 GGTGTTAAGCGTATCAGCGGCTTAATCTACGAGGAGACTCGTGGCGTTCTAAAGATCTTC 563649 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| || | |||||| || ||| || ||||| || | ||||| || Sbjct 563650 CTTGAGAACGTCATTCGTGATGCAGTCACCTACACGGAGCATGCCCGCAGGAAGACGGTG 563709 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||| |||||||| | ||||| || | || | || || || | |||||||||| ||| Sbjct 563710 ACCGCCATGGATGTTGTCTACGCTCTAAAGAGGCAGGGACGCACCCTTTATGGTTTCGGA 563769 >seq403 Length=2629907 Score = 114 bits (126), Expect = 2e-21 Identities = 193/278 (69%), Gaps = 1/278 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | ||| || ||||||||||| || ||||| ||||| || || Sbjct 728033 CGCAAAGCGGCACCGGAAGGTTCTCCGGGATAACATCCAGGGTATCACGAAGCCGGCGAT 728092 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||| | | || || || |||||| | || || || |||| || || | Sbjct 728093 CCGCCGTCTGGCCAGAAGAGGCGGCGTGAAGCGTATTTCCGGTCTGATCTACGAGGAAAC 728152 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || | ||||| ||| | ||| ||||||| ||||| | ||| ||||| Sbjct 728153 TCGCGGAGTCCTCAAGATATTCTTGGAGAATGTTATCCGCGATGCGGTTACCTACACCGA 728212 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| | ||||| || || ||||||| |||| || || ||||| | ||||| Sbjct 728213 GCACGCACGGAGGAAGACGGTTACTGCCATGGACGTCGTTTACGCGCTGAAAAGACAAGG 728272 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT-CTTCTAAT 16708 ||| | | || || || || |||| | |||| ||| Sbjct 728273 CCGAACTCTCTACGGATTCGGCGGTTAGTGCTTCAAAT 728310 >seq507 Length=3453940 Score = 113 bits (124), Expect = 7e-21 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | ||| || || |||||||| || ||||| ||||| || || Sbjct 1465344 GCAAAGCGTCACCGGAAGGTTCTACGGGACAACATCCAGGGGATCACGAAGCCTGCAATA 1465285 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || |||||||| | | || || ||||| ||| | ||||| || |||| || || | Sbjct 1465284 CGCCGTCTGGCCAGAAGAGGCGGCGTCAAACGTATTTCTGGCCTGATCTACGAGGAAACC 1465225 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| | ||||| ||| | ||| || || | ||||| || ||| |||||| Sbjct 1465224 CGCGGAGTTCTCAAGATTTTCTTGGAGAATGTCATACGCGATGCCGTCACCTACACCGAG 1465165 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| | ||||| || ||| ||||||| |||| || || ||||| | |||||| Sbjct 1465164 CACGCGCGGAGGAAGACGGTTACCGCCATGGACGTCGTTTACGCTCTGAAAAGACAAGGC 1465105 Query 16673 CG 16674 || Sbjct 1465104 CG 1465103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074726388974