Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq414 214 2e-50 seq507 116 5e-21 >seq414 Length=5667865 Score = 214 bits (236), Expect = 2e-50 Identities = 596/908 (66%), Gaps = 10/908 (1%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||||| || || | ||||| ||||| || || || | ||| ||| | Sbjct 3473778 TTTTGGTACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGT 3473719 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| | || || || || |||| || | || || | |||||| || | | Sbjct 3473718 TCCATCCAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGTACCCCAATGCAACCAAC 3473659 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 ||||||||||| ||||| ||||| ||| ||||| || |||||||||| | || Sbjct 3473658 AATCTATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGC 3473599 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 | || | || || || ||| || |||||| || ||||| | | | Sbjct 3473598 CTGCACGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGAGC 3473539 Query 33253 GATCTAACGGTTTCTTCACTCGG--TGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 || ||||||||||| | | | || | | || | | ||| || |||| Sbjct 3473538 CCGTGCACCGTTTCTTCACTAAGCTTCACTTTAAGCA--GACTATAGAGCAAGCAAGCGA 3473481 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | || || || | |||||| || | ||| || || ||||| || || | ||||||| Sbjct 3473480 AGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGCA 3473421 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | || || | |||||| | ||| ||||| | | ||| ||| || || || || |||| Sbjct 3473420 TCAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAATATACCTT 3473361 Query 33431 CTACTGCAG-CAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT--CATGTATCCACT 33487 | || |||| |||| || | || |||||| | | || | | | ||| ||||| Sbjct 3473360 CCAC-GCAGGCAAAAGCCAGTAGCCTCTCTGCGAA--CGACTCAGAACCATCGATCCAAC 3473304 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 | |||||| |||||||| | |||||||| | ||||| || ||| ||||| Sbjct 3473303 GAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGAGCC 3473244 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 | | ||||| | | ||| || | ||||| || | | |||||||||||| || || | Sbjct 3473243 TGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCAGAGT 3473184 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667 | ||||||||||| || ||||| || ||||| || | |||||| | || ||| || | Sbjct 3473183 GGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGGACCT 3473124 Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727 | | || | | || | |||||| ||| || ||||| ||| || ||||| | Sbjct 3473123 CCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGAAAAAAG 3473064 Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 33787 | | | |||||| || |||| |||||||| | || || | ||| | | || || Sbjct 3473063 CTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAGCGAGAT 3473004 Query 33788 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGT 33847 ||| ||| | ||| || || ||| | ||||| || || || ||||| || || ||||| | Sbjct 3473003 CTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATCT 3472944 Query 33848 TCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGA 33907 |||||| | | || || |||||||| || || | || || ||||| ||||||| Sbjct 3472943 CCCAGATTTGAGGGTACTGAATTGGGAACATGCAGAAGCGATCTGCGTTTGGGGCAAGGA 3472884 Query 33908 TGGGTTCC 33915 ||||||| Sbjct 3472883 GGGGTTCC 3472876 Score = 208 bits (230), Expect = 9e-49 Identities = 595/911 (65%), Gaps = 18/911 (2%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||||||||| || || | || || ||||| || || || | ||| ||| Sbjct 275300 TTTTGGTATTCACCAACTCGCCTCTCAAAGAAATTGGTCTTCCCCTGCAAACTTATGAGC 275241 Query 33073 TCCATGAAATCAAACGGATTG-GTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 33131 ||||| ||||||| ||||| || | || || | || ||| | ||||| | Sbjct 275240 TCCATCCAATCAAAAGGATTATGTGAG-TTGTACAACTTCTTATACCCCAAGGTGACCAG 275182 Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191 |||| ||||||| || || ||||| ||| |||||| || | |||||||| | ||| Sbjct 275181 CAATTTATCCGCCACAAACTCTATGTATTGGCTCATCAACTCTGAGTTCATTCCCAGAAG 275122 Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 | || | || || || ||| ||| |||||| || ||||| | | || Sbjct 275121 CCTGCAAGGTAACGCATCACAAACAAACTCTCTTTCAATATTCACTGCATCCGCCACAAG 275062 Query 33252 AGATCTAACGGTTTCTTCACTCGGTG------GATGCAATAAATGTTTAAACATCAAACA 33305 || |||||||||| || || ||| | || | || || || Sbjct 275061 CCCATGCACCTTTTCTTCACTAAGTTTCCCTCGAAGCA------GACTATAGATTAAGCA 275008 Query 33306 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCC 33365 |||||||| || || ||||| || || | ||| ||||| ||||| || || | || Sbjct 275007 AGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACC 274948 Query 33366 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGAT 33425 ||||| | ||| | ||||| | ||| ||||| | ||| ||| || || || || Sbjct 274947 AGGCATCAAGCCCCTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAGAAAAATAT 274888 Query 33426 TCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT--CATGTATC 33483 ||||| || ||||||||| | || |||||| | || | | | | | | ||| Sbjct 274887 GCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAA--GACTCAGAACCCTCGATC 274830 Query 33484 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33543 || | ||||||| |||||||||| ||||| || | ||||| || ||| ||| Sbjct 274829 CAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAG 274770 Query 33544 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 33603 || | | | || || | | ||| || | || || || | | ||||||||||| || Sbjct 274769 AGCTTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTATACATCTCT 274710 Query 33604 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 33663 || ||||| |||||||| || ||||| || || || || || ||||| | || ||| Sbjct 274709 GAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACCTGG 274650 Query 33664 ACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33723 || || | |||| | |||| ||| || || ||||| || || || || Sbjct 274649 ACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCGAAG 274590 Query 33724 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 33783 || || | |||||||| || |||| || ||||| | ||| || ||||| | | | Sbjct 274589 AAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGTGACGG 274530 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843 | ||||| |||| ||| ||||||||| | |||||||| || ||||||||||| || ||| Sbjct 274529 AGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTGTAC 274470 Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCA 33903 || | |||||| ||| || || |||||||| || || | || || || || ||| Sbjct 274469 ATCTCCCAGATTTCAGGGTACTGAATTGGGAACATGCAGAAGCGATCAGGGTTGGGGGCA 274410 Query 33904 AGGATGGGTTC 33914 || | ||||| Sbjct 274409 AGAAGCGGTTC 274399 >seq507 Length=3453940 Score = 116 bits (128), Expect = 5e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 63612 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63671 ||||| ||||| || | || |||||||| || |||||||||| | ||| | |||| | Sbjct 789709 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 789768 Query 63672 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63730 || || | || ||| || || ||||| | ||| || || || || || || | ||| | Sbjct 789769 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 789827 Query 63731 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63790 ||| || |||||||||||||| | || ||| || || | | |||||| ||||||| Sbjct 789828 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 789887 Query 63791 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 789888 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 789935 Score = 116 bits (128), Expect = 5e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 63612 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63671 ||||| ||||| || | || |||||||| || |||||||||| | ||| | |||| | Sbjct 791906 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 791847 Query 63672 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63730 || || | || ||| || || ||||| | ||| || || || || || || | ||| | Sbjct 791846 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 791788 Query 63731 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63790 ||| || |||||||||||||| | || ||| || || | | |||||| ||||||| Sbjct 791787 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 791728 Query 63791 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 791727 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 791680 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 63372 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63431 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| || Sbjct 789399 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 789458 Query 63432 TTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 63491 || ||| | ||||| ||||| ||||||||||| ||||||| || || || || Sbjct 789459 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 789518 Query 63492 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATA 63551 ||||| || || || || ||| || | || ||| || | || ||||| || Sbjct 789519 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 789578 Query 63552 CCCTCTATGCTATCATCGATCATG 63575 ||||| || ||||| || ||||| Sbjct 789579 CCCTCAATACTATCTTCCTTCATG 789602 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 63372 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63431 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| || Sbjct 792216 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 792157 Query 63432 TTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 63491 || ||| | ||||| ||||| ||||||||||| ||||||| || || || || Sbjct 792156 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 792097 Query 63492 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATA 63551 ||||| || || || || ||| || | || ||| || | || ||||| || Sbjct 792096 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 792037 Query 63552 CCCTCTATGCTATCATCGATCATG 63575 ||||| || ||||| || ||||| Sbjct 792036 CCCTCAATACTATCTTCCTTCATG 792013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943166416880