Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 seq415 86.0 6e-12 seq304 86.0 6e-12 seq317 82.4 7e-11 >seq1 Length=8502017 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||| || || |||| || | || | || || | Sbjct 712308 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATTACGCTGGAGGTGGAGTCTTCC 712249 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || |||||| ||||| |||||||| ||||||||||| Sbjct 712248 GACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGGATCCCTCCCGATCAG 712189 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | || ||| || || || || |||| | | || |||||| ||| Sbjct 712188 CAGCGGTTGATCTTCGCCGGGAAGCAGCTTGAGGATGGACGGACGCTCGCCGACTACAAC 712129 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| |||||||| ||||||| || || Sbjct 712128 ATTCAAAAGGAATCTACGCTCCATCTTGTGCT 712097 >seq415 Length=3446356 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| | || || || | |||||| |||| | || | Sbjct 2241442 ATGCAGATTTTCGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGAGTTCC 2241383 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| ||||| || ||||| ||||| ||||| Sbjct 2241382 GACACTATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAGGGGATTCCTCCAGATCAG 2241323 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||| || || | | ||||||||||||||| |||| | | | | | |||||| ||| Sbjct 2241322 CAAAGGCTTATCTTTGCCGGCAAACAACTCGAGGATGGTCGTACCCTTGCCGACTACAAC 2241263 Query 26949 ATTCAAAAAGAATCTAC 26965 || || |||||||| || Sbjct 2241262 ATCCAGAAAGAATCGAC 2241246 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA-ATCAA 26826 |||||| | || || ||||| | ||||| ||| | ||||| |||| | || | | Sbjct 2240987 AATGCAGATATTCGTGAAAACCCTCACTGGGAAAACCATCACTCTCGAGGTTGAGAGCTC 2240928 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 | |||||||| || | ||||| || || |||||||| || || ||||| || | Sbjct 2240927 A-GACACCATTGACAATGTCAAGGCCAAAATCCAAGACAAAGAGGGTATCCCTCCAGACC 2240869 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | ||||| ||||| | || |||||| || || ||||| | | | | | ||||||| Sbjct 2240868 AGCAAAGGCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTGCGGACTATA 2240809 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||| || || || || ||||||| || || Sbjct 2240808 ACATTCAGAAGGAGTCCACCCTCCATCTTGTTCT 2240775 >seq304 Length=3547449 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| | || || || |||| || | || | ||||| Sbjct 3199268 AAGATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACGATTACTCTGGAGGTGGAATCC 3199209 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | || || |||||| || || |||||||| ||||| ||| Sbjct 3199208 TCCGACACCATCGACAATGTGAAGGCCAAGATTCAGGATAAGGAAGGGATTCCTCCGGAT 3199149 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | | || | || ||| || || |||||||||| | | || ||||||| Sbjct 3199148 CAGCAGCGGTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGACGCACTCTCGCCGACTAT 3199089 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || ||||| || | || |||||||| Sbjct 3199088 AACATCCAGAAGGAATCCACACTGCACCTGGTCCT 3199054 >seq317 Length=1979591 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| | || || || |||| || | || |||| || Sbjct 618094 AAGATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACGATTACGCTAGAGGTAGAGTCC 618153 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||| ||||| | || || |||||| ||||| ||||| || ||||| ||| Sbjct 618154 TCCGACACTATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAAGGTATCCCTCCGGAT 618213 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || ||| | | || | || ||| || || || || |||| | | || |||||| Sbjct 618214 CAGCAACGGTTGATATTCGCCGGGAAGCAGCTTGAGGATGGGCGCACGCTCGCCGACTAC 618273 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| || ||||| || | ||||||||||| Sbjct 618274 AACATTCAGAAGGAATCAACGCTGCATCTGGTCCT 618308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659300660960