Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq3 89.7 4e-13 seq304 87.8 2e-12 >seq1 Length=8502017 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||| || || ||||||| | || || ||| | | Sbjct 712308 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATTACGCTGGAGGTGGAGTCTTCC 712249 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| ||||| ||||| || ||||||||||| Sbjct 712248 GACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGGATCCCTCCCGATCAG 712189 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACGTCAGCGATTATAA 24169 ||| | |||| | || ||| ||||| || || |||| || || | || ||| || || Sbjct 712188 CAGCGGTTGATCTTCGCCGGGAAGCAGCTTGAGGATGGACGGACGC-TCGCCGACTACAA 712130 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||||||| |||||||| | ||| | ||| Sbjct 712129 CATTCAAAAGGAATCTACGCTCCATCTTGTG 712099 >seq3 Length=5347415 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || ||||||| || | || || | ||||| ||| | Sbjct 3172818 ATGCAGATCTTTGTCAAGACTCTAACTGGCAAGACCATAACTCTTGAAGTGGAGAGCTCT 3172759 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| || || ||||| || || || || || Sbjct 3172758 GACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCAG 3172699 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||||| || | || |||||||| || || |||| | | | | || |||||||||| Sbjct 3172698 CAGAGACTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCCGATTATAAC 3172639 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||| || || || Sbjct 3172638 ATCCAAAAGGAGTCCAC 3172622 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| | || |||||| | || ||| |||| || || | Sbjct 3173046 ATGCAGATCTTCGTGAAAACCCTCACAGGAAAAACAATCACCCTCGAGGTGGAAAGTTCC 3172987 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || ||| ||||| ||||| ||||| || || || ||||| Sbjct 3172986 GACACCATTGACAATGTTAAAGCCAAGATCCAGGACAAGGAAGGAATTCCCCCGGATCAG 3172927 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || ||||||| | ||||||||||||||| |||| | | | | ||| || ||| Sbjct 3172926 CAAAGGCTGATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTTGCCGACTACAAC 3172867 Query 24171 ATTCAAAAAGAATCTAC 24187 || || |||||||| || Sbjct 3172866 ATCCAGAAAGAATCGAC 3172850 >seq304 Length=3547449 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || ||||| | || || || ||||||| | || || || || Sbjct 3199268 AAGATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACGATTACTCTGGAGGTGGAATCC 3199209 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | || || |||||| || || ||||| || ||||| ||| Sbjct 3199208 TCCGACACCATCGACAATGTGAAGGCCAAGATTCAGGATAAGGAAGGGATTCCTCCGGAT 3199149 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| | |||| | || ||| ||||| |||||||||| | | || ||| ||| Sbjct 3199148 CAGCAGCGGTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGACGCACTCTCGCCGACTAT 3199089 Query 24168 AACATTCAAAAAGAATCTACA 24188 ||||| || || ||||| ||| Sbjct 3199088 AACATCCAGAAGGAATCCACA 3199068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933285760290