Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq415 86.0 5e-12 seq3 82.4 6e-11 >seq415 Length=3446356 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| ||||| || ||||||||||| ||||| || || ||| | || |||| | Sbjct 2240303 AATGCAGATTTTCGTGAAAACGCTCACCGGAAAGACGATCACCTTGGAGGTGGAGAGCTC 2240244 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || ||| | ||||| || || || ||| || || || || ||||| |||| Sbjct 2240243 TGATACT-ATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCAGATC 2240185 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || ||||| | || || || || | ||||||| | ||| |||| ||||| | Sbjct 2240184 AGCAGAGGCTTATCTTCGCAGGGAAGCAGCTGGAAGATGGGAGGACCTTGGCTGATTACA 2240125 Query 115464 ACATTCAAAAAGAGTCTAC 115482 ||||||| |||||||| || Sbjct 2240124 ACATTCAGAAAGAGTCCAC 2240106 >seq3 Length=5347415 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 ||||| || || || ||||| ||||| |||||||| || ||| |||| ||| || | Sbjct 3173046 ATGCAGATCTTCGTGAAAACCCTCACAGGAAAAACAATCACCCTCGAGGTGGAAAGTTC- 3172988 Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 |||||| ||| |||| || ||| || || || || ||||| | ||| ||| Sbjct 3172987 -CGACACCATTG-ACAATGTTAAAGCCAAGATCCAGGACAAGGAAGGAATTCCCCCGGAT 3172930 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 |||||||| || |||| ||| ||||| ||| | || |||| ||| | ||||| || Sbjct 3172929 CAGCAAAGGCTGATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTTGCCGACTAC 3172870 Query 115463 AACATTCAAAAAGAGTCTAC 115482 ||||| || ||||| || || Sbjct 3172869 AACATCCAGAAAGAATCGAC 3172850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425341314750160