Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq255 102 7e-17 seq415 93.3 3e-14 seq3 93.3 3e-14 seq1 93.3 3e-14 >seq255 Length=3424836 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || |||| || |||||| |||||| || || |||||||| || Sbjct 2252970 CCTCCCCTCAGCCTGAGCACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAGTCAGCG 2253029 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| || || || ||| | ||||||| ||| || ||| || Sbjct 2253030 AGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGGGGG 2253089 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || |||||| ||||| | | | | |||||| | || Sbjct 2253090 ATTCCCTCCTTGTCCTGGATTTTTGCT--TTCACATTGTCGATGGTGTCGGAGCTTTCGA 2253147 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||||| ||||| || || || |||||||||||||| Sbjct 2253148 CCTCCAAAGTGATGGTTTTCCCGGTGAGGGTCTTCACAAAAATCTGCAT 2253196 >seq415 Length=3446356 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||| || || |||||||| || |||| ||| | | || |||| || Sbjct 2240100 TGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCCAAGGTCCTCCCATCTTCCAGCTGC 2240159 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | ||||||| ||| || || || | ||||| ||||| ||| | Sbjct 2240160 TTCCCTGCGAAGATAAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGAATCTTG 2240219 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | ||| || | |||| |||| |||||| || |||||||| Sbjct 2240220 GCCTTCACATTGTCGATAGTATCAGAGCTCTCCACCTCCAAGGTGATCGTCTTTCCGGTG 2240279 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 |||||||| || |||||||||||| Sbjct 2240280 AGCGTTTTCACGAAAATCTGCATT 2240303 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| |||| || || || || || |||||||||||||| Sbjct 2241216 CCTCCACGGAGGCGGAGAACCAAGTGCAAGGTCGATTCTTTCTGGATGTTGTAGTCGGCA 2241275 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | ||||||||| ||| | ||||||| || || || ||| Sbjct 2241276 AGGGTACGACCATCCTCGAGTTGTTTGCCGGCAAAGATAAGCCTTTGCTGATCTGGAGGA 2241335 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || ||| || | | | | ||||||| |||| Sbjct 2241336 ATCCCCTCCTTGTCCTGGATCTTGGC--CTTAACATTGTCGATAGTGTCGGAACTCTCCA 2241393 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || || || || ||||| || ||||||||||| Sbjct 2241394 CCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACGAAAATCTGCAT 2241442 >seq3 Length=5347415 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||||| || |||| || || ||| |||||| || ||||||||||| ||| Sbjct 3172364 CCACCTCTCAGCCTTAGGACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCC 3172423 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||||| || || || ||| | || | || ||| |||||| || Sbjct 3172424 AATGTGCGCCCGTCCTCCAGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 3172483 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT- 16887 | ||| || || || ||||| |||||| | | | | |||| ||| |||| | Sbjct 3172484 ATGCCTTCCTTATCCTGAATTTTAGCCTTCACGTTGTCGATGGTGT--CCGAGCTCTCTA 3172541 Query 16888 -TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||| ||||| || || || || || |||||||| |||||||| Sbjct 3172542 CTTCGAGGGTAATGGTCTTGCCAGTTAGAGTCTTGACAAAGATCTGCAT 3172590 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||| || |||| || || | || |||| || Sbjct 3172160 TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCTGCCATCTTCCAGCTGC 3172219 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850 || || || | || |||| ||| |||||| || | ||||||||||| || ||| Sbjct 3172220 TTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCCTCTTTGTCCTGAATCTTT 3172279 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | ||||| | |||| |||| |||||| ||||| || | Sbjct 3172280 GC--CTTCACGTTGTCTATGGTGTCCGAGCTCTCCACCTCCAAGGTGATTGTTTTCCCAG 3172337 Query 16911 TCAGCGTTTTGACAAAAATCTGCATT 16936 | || || || || || ||||||||| Sbjct 3172338 TGAGAGTCTTCACGAAGATCTGCATT 3172363 >seq1 Length=8502017 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| ||||| || |||||||| || || | ||| | | ||||| | || Sbjct 7226816 TGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTCCTTCCATCCTCAAGCTGC 7226757 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| | || | || ||| || || ||| | ||||| ||||| |||| | Sbjct 7226756 TTCCCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATCCCCTCCTTGTCCTGGATTTTC 7226697 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | ||||| | |||| |||| ||||||||| |||||||| Sbjct 7226696 GCCTTCACGTTGTCGATGGTGTCTGAGCTCTCCACCTCCAGGGTGATGGTCTTTCCGGTG 7226637 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || || ||||| |||||||||||| Sbjct 7226636 AGGGTCTTGACGAAAATCTGCATT 7226613 Score = 87.8 bits (96), Expect = 1e-12 Identities = 155/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || |||| || || ||| |||||| || ||||||||||| || | ||| | Sbjct 7226375 AGCCTGAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGG 7226316 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||| | || || || ||| | || |||||||| ||||| || | ||||||| Sbjct 7226315 CCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCGCTGCTGGTCTGGGGGGATGCCCTCT 7226256 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC--TCCGTTTCCAC 16893 ||||| || || ||| || || | | | ||||| ||| || || || | Sbjct 7226255 TTGTCTTGGATCTTCGCT--TTGACGTTATCGATAGTGT--CCGAGCTTTCAACCTCAAG 7226200 Query 16894 GGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||||| || || || || || || ||||| |||||||| Sbjct 7226199 GGTGATGGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCAT 7226158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085442628820