Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq414 188 9e-43 seq507 116 5e-21 >seq414 Length=5667865 Score = 188 bits (208), Expect = 9e-43 Identities = 395/584 (68%), Gaps = 6/584 (1%) Strand=Plus/Minus Query 32655 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 32714 || || || |||||||| || || ||||| || || | ||| | ||| ||||| || Sbjct 275015 ATTAAGCAAGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAG 274956 Query 32715 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCAGA 32773 || | || ||||| | ||| | ||||| | ||| ||||| | |||| | | | || || Sbjct 274955 GTCAAACCAGGCATCAAGCCCCTTTTTTTCAACCAGAATATAG-CGCAGAAGCTTCCGGA 274897 Query 32774 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT- 32832 || || || ||||| || |||||||| | || |||||| | || | | | | Sbjct 274896 GAAAAATATGCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAA--GACTCAGAA 274839 Query 32833 -CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 32891 | | ||||| | ||||||| |||||||||| ||||| || | || || || Sbjct 274838 CCCTCGATCCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATC 274779 Query 32892 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 32951 ||| ||||| | | | || || | | ||| || | ||||| || | | |||||| Sbjct 274778 GCACGGAAGAGCTTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTA 274719 Query 32952 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCG 33011 ||||| || || ||||| |||||||| || || || || || || || || ||||| Sbjct 274718 TACATCTCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCC 274659 Query 33012 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 33071 | || ||| || || | |||| | || | ||| || || ||||| || Sbjct 274658 GAAACCTGGACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGAT 274599 Query 33072 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTC 33131 || || || || || | |||||||| || |||| || ||||| | ||| || ||| Sbjct 274598 GCCGCGAAGAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTC 274539 Query 33132 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33191 || | | || ||||| |||| ||| ||||||||| | |||||||| || ||||||||| Sbjct 274538 CAGTGACGGAGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCC 274479 Query 33192 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 33235 || || ||||| | |||||| ||| | || |||||||| || || Sbjct 274478 TTCTTGTACATCTCCCAGATTTCAGGGTACTGAATTGGGAACAT 274435 Score = 181 bits (200), Expect = 1e-40 Identities = 591/909 (65%), Gaps = 12/909 (1%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| ||||| || || | ||||| ||||| || || || | || ||| | Sbjct 3473778 TTTTGGTACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGT 3473719 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||| | ||||| || || |||| || | || || | |||||| || | | Sbjct 3473718 TCCATCCAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGTACCCCAATGCAACCAAC 3473659 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 |||||||| || || || ||||| ||| ||||| || |||||||||| | || Sbjct 3473658 AATCTATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGC 3473599 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609 | || | || || || ||| || ||||||| || || || | | | Sbjct 3473598 CTGCACGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGA-- 3473541 Query 32610 GATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAAT-GTTTAAACATCAAACATGCG 32666 | | | || ||||||||||| | || ||| | || | | ||| || ||| Sbjct 3473540 GCCCGTGCACCGTTTCTTCACTAAGCTTC-ACTTTAAGCAGACTATAGAGCAAGCAAGCG 3473482 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 || || || |||| |||||| || | ||| | || ||||| || || | |||||| Sbjct 3473481 AAGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGC 3473422 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCAGAAAAGAAAATTCC 32785 || || || | |||||| | ||| ||||| | | || | | | || || || || || || Sbjct 3473421 ATCAGACCCCTCTTTTTCAACCAGAATATTG-CACAGAAGCTTCCCGAGAAAAATATACC 3473363 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT--CATGTATCCAC 32843 ||| || ||||| || | || |||||| | | || | | | ||| ||||| Sbjct 3473362 TTCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAA--CGACTCAGAACCATCGATCCAA 3473305 Query 32844 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 32903 | |||||| |||||||| | |||||||| | || || |||||| ||||| Sbjct 3473304 CGAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGAGC 3473245 Query 32904 TAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAA 32963 | | ||||| | | ||| || | || || || | | |||||||||||| || || Sbjct 3473244 CTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCAGAG 3473185 Query 32964 TGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACT 33023 || ||||||||||| || || || || ||||| || | |||||| | || ||| || Sbjct 3473184 TGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGGACC 3473125 Query 33024 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33083 || | || | | || | |||||| ||| || ||||| ||| || ||||| Sbjct 3473124 TCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGAAAAAA 3473065 Query 33084 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATA 33143 || | | |||||| || |||| |||||||| | || || | ||| | | || | Sbjct 3473064 GCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAGCGAGA 3473005 Query 33144 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 33203 |||| ||| | ||| || || ||| | ||||| || || || ||||| || || ||||| Sbjct 3473004 TCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATC 3472945 Query 33204 TTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGG 33263 | |||||| | | | || |||||||| || || || | || || ||| |||||| Sbjct 3472944 TCCCAGATTTGAGGGTACTGAATTGGGAACATGCAGAAGCGATCTGCGTTTGGGGCAAGG 3472885 Query 33264 ATTGGTTCC 33272 | |||||| Sbjct 3472884 AGGGGTTCC 3472876 >seq507 Length=3453940 Score = 116 bits (128), Expect = 5e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 ||||| ||||| || | || |||||||| || |||||||||| | ||| | |||| | Sbjct 789709 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 789768 Query 63527 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63585 || || | || ||| || || ||||| | ||| || || || || || || | ||| | Sbjct 789769 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 789827 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 ||| || |||||||||||||| | || ||| || || | | |||||| ||||||| Sbjct 789828 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 789887 Query 63646 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 789888 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 789935 Score = 116 bits (128), Expect = 5e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 ||||| ||||| || | || |||||||| || |||||||||| | ||| | |||| | Sbjct 791906 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 791847 Query 63527 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63585 || || | || ||| || || ||||| | ||| || || || || || || | ||| | Sbjct 791846 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 791788 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 ||| || |||||||||||||| | || ||| || || | | |||||| ||||||| Sbjct 791787 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 791728 Query 63646 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 791727 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 791680 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 63227 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 63286 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| ||| Sbjct 789399 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 789458 Query 63287 TTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 63346 || ||||| ||||| || || ||||||||||| ||||||| || || || || Sbjct 789459 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 789518 Query 63347 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 63406 ||||| || || || || ||| || | || ||| || | |||||||| ||| Sbjct 789519 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 789578 Query 63407 CCCTCTATACTATCATCCATCATG 63430 ||||| |||||||| ||| ||||| Sbjct 789579 CCCTCAATACTATCTTCCTTCATG 789602 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 63227 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 63286 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| ||| Sbjct 792216 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 792157 Query 63287 TTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 63346 || ||||| ||||| || || ||||||||||| ||||||| || || || || Sbjct 792156 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 792097 Query 63347 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 63406 ||||| || || || || ||| || | || ||| || | |||||||| ||| Sbjct 792096 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 792037 Query 63407 CCCTCTATACTATCATCCATCATG 63430 ||||| |||||||| ||| ||||| Sbjct 792036 CCCTCAATACTATCTTCCTTCATG 792013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627897232800