Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq482 105 6e-18 seq415 102 7e-17 seq3 87.8 2e-12 seq304 86.0 5e-12 seq1 86.0 5e-12 seq317 84.2 2e-11 >seq482 Length=739299 Score = 105 bits (116), Expect = 6e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || ||||| | || || | || |||||||| || Sbjct 128152 ATGCAGATCTTTGTGAAGACCCTCACGGGTAAGACGATTACGCTGGAGGTGGAGTCCTCG 128093 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || | || || | ||| ||||| |||||||| || || || Sbjct 128092 GACACCATTGA--CAATGTCAAGGCCAAGATTCAG-GACAAGGAAGGGATCCCTCCGGAT 128036 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || |||||| | || || ||||| || || | ||||||| || ||| | | |||||| Sbjct 128035 CAGCAGCGGTTAATCTTCGCCGGGAAGCAGCTTGAAGATGGACGTACTCTTGCTGATTAC 127976 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || ||||| || || ||| | || || Sbjct 127975 AATATTCAGAAGGAATCTACACTGCATCTGGTCCT 127941 >seq415 Length=3446356 Score = 102 bits (112), Expect = 7e-17 Identities = 147/204 (72%), Gaps = 5/204 (2%) Strand=Plus/Minus Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053 |||| ||||| || || || || || | || || || | ||||| |||| |||||| Sbjct 2241447 AACAGATGCAGATTTTCGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGA 2241388 Query 25054 CGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 || ||||||||||| || || ||| || ||| ||||| || |||||||| || Sbjct 2241387 GTTCCGACACTATCGA--CAATGTTAAGGCCAAGATCCAGGACAAGGAGGGGATTCCTCC 2241330 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 || || || || |||| ||||||||||||||| | || |||| ||| || | | ||| Sbjct 2241329 AGATCAGCAAAGGCTTATCTTTGCCGGCAAACAACTCGAGGATGGTCGTACCCTTGCCGA 2241270 Query 25172 TTACAATATTCAAAAAGAATCCAC 25195 ||||| || || |||||||| || Sbjct 2241269 CTACAACATCCAGAAAGAATCGAC 2241246 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || || ||| ||||||| | || || || || Sbjct 2240530 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATCACCCTTGAGGTCGAAAGCTCG 2240471 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| ||||| | || | ||| || || || || || || || || || Sbjct 2240470 GATACGATCGACAATGTGAAGGCGAAGATTCAG-GATAAGGAGGGAATCCCCCCGGATCA 2240412 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||||||||| || | || || | ||||| ||| || ||||| Sbjct 2240411 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGCACCTTGGCGGACTACAA 2240352 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || ||||| || ||| || || ||||| || | || ||||| |||| Sbjct 2240351 CATCCAAAAGGAGAGCACTCTCCACTTAGTCCTCCGCCTGAGAGGTGGAA 2240302 >seq3 Length=5347415 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/205 (71%), Gaps = 7/205 (3%) Strand=Plus/Minus Query 24995 AACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053 |||| ||||| || || || || || | || || ||| | ||||| |||| ||||| Sbjct 3173051 AACAGATGCAGATCTTCGTGAAAACCCTCACAGGAAAAACAATCACCCTCGAGGTGGAAA 3172992 Query 25054 CGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110 || ||||| || || || || |||| || | || ||||| ||||| ||||| | Sbjct 3172991 GTTCCGACACCATTGA--CAATGTTAAAGCCAAGATCCAG-GACAAGGAAGGAATTCCCC 3172935 Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170 | || || || || | |||||||||||||| ||| | || |||| ||| || | | || Sbjct 3172934 CGGATCAGCAAAGGCTGATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTTGCCG 3172875 Query 25171 ATTACAATATTCAAAAAGAATCCAC 25195 | ||||| || || |||||||| || Sbjct 3172874 ACTACAACATCCAGAAAGAATCGAC 3172850 >seq304 Length=3547449 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || || || | || || | || ||||| || || Sbjct 3199265 ATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACGATTACTCTGGAGGTGGAATCCTCC 3199206 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| || || ||||||||||| || || || Sbjct 3199205 GACACCATCGACAATGTGAAGGCCAAGATTCAG-GATAAGGAAGGGATTCCTCCGGATCA 3199147 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || ||||| || || | ||||||| |||||| | | ||| || || Sbjct 3199146 GCAGCGGTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGACGCACTCTCGCCGACTATAA 3199087 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || |||||||| || || Sbjct 3199086 CATCCAGAAGGAATCCACACTGCA 3199063 >seq1 Length=8502017 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || ||||| ||||||| | || || || || Sbjct 7226158 ATGCAGATCTTTGTGAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTTGAAAGCTCG 7226217 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| |||| || ||| |||||||| || || || || || Sbjct 7226218 GACACTATCGATAACGTCA---AAGC-GAAGATCCAAGACAAAGAGGGCATCCCCCCAGA 7226273 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| |||||| | || |||||||| || || | || || | ||||| | | || || Sbjct 7226274 CCAGCAGCGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTA 7226333 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || || || ||| || || || || || ||||| || || || Sbjct 7226334 CAACATCCAGAAGGAGAGCACCCTCCACTTGGTCCTCAGGCTGAGGGGTGG 7226384 >seq317 Length=1979591 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || || || | || || | || || ||||| || Sbjct 618097 ATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACGATTACGCTAGAGGTAGAGTCCTCC 618156 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| |||| || || | ||| ||||| ||||| || || || || || Sbjct 618157 GACACTATCGACAACGTGAAGGCGAAGATTCA-GGACAAGGAAGGTATCCCTCCGGATCA 618215 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || ||| | || || ||||| || || | || |||| ||||| | | ||| ||||| Sbjct 618216 GCAACGGTTGATATTCGCCGGGAAGCAGCTTGAGGATGGGCGCACGCTCGCCGACTACAA 618275 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || ||||| ||||| ||| | || || Sbjct 618276 CATTCAGAAGGAATCAACGCTGCATCTGGTCCT 618308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325264346170