Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq414 178 1e-39 seq244 89.7 6e-13 seq1 87.8 2e-12 seq98 86.0 7e-12 seq452 82.4 9e-11 seq415 82.4 9e-11 seq413 82.4 9e-11 >seq414 Length=5667865 Score = 178 bits (196), Expect = 1e-39 Identities = 391/583 (67%), Gaps = 5/583 (1%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 ||||| || ||||| ||||||||| || || || || || | ||||||| ||| || Sbjct 3473490 AAGCAAGCGAAGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTC 3473431 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 || || || | ||| || | || || | ||| ||||||| | || || || || ||| Sbjct 3473430 AACCCGGGCATCAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAA 3473371 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 ||||||||||||||| ||||| |||| | | || || || | ||| | | Sbjct 3473370 AATATACCTTCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAACGACTCAGAACCATCG 3473311 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 ||||| | |||||| || || |||| | |||||| | ||||| ||||| Sbjct 3473310 ---ATCCAACGAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCA 3473254 Query 93329 TTAAATAGG-TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || | ||| || || ||||| ||||| || || | || ||| ||| Sbjct 3473253 CGGAAGAGCCTGCTCTTT-TCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATA 3473195 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 ||| ||||| |||| || || |||||||| ||||| ||||| || | ||| |||| Sbjct 3473194 CATCTCAGAGTGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGA 3473135 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 | ||| || || | || || | |||||||||| || || || ||||| || Sbjct 3473134 AACCTGGACCTCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGC 3473075 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCA 93567 || |||||||| | ||||| || || ||||| || || ||| | || | ||| Sbjct 3473074 GGCGAAAAAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCA 3473015 Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 | | ||||||| || |||||||| || || | ||||| || || ||||||||||| Sbjct 3473014 GTGAGCGAGATCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTT 3472955 Query 93628 TTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670 |||||||| ||||| || | | || |||||||| || ||| Sbjct 3472954 CTTGTACATCTCCCAGATTTGAGGGTACTGAATTGGGAACATG 3472912 Score = 158 bits (174), Expect = 1e-33 Identities = 406/609 (67%), Gaps = 11/609 (2%) Strand=Plus/Minus Query 93083 TACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTG 93142 || |||||||| || || || ||| | |||||| || || || || | |||||| | Sbjct 275018 TAGATTAAGCAAGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAG 274959 Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA-CTACC 93201 || || ||||| || | || || | ||| || | ||| ||||| | ||| || || || Sbjct 274958 AAGGTCAAACCAGGCATCAAGCCCCTTTTTTTCAACCAGAATATAGC-GCAGAAGCTTCC 274900 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 || |||||||| ||||| || ||||| || | | | || | |||| | || Sbjct 274899 GGAGAAAAATATGCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAAGACTCAGA 274840 Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321 | || |||||| | ||||||| || || || | | ||| || | ||||| Sbjct 274839 ACC-CTC--GATCCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTC 274783 Query 93322 GATAGCGTTAAATAGGTAATCTCG-CTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 || || || || | ||| ||| || ||||| |||||||| || | | | Sbjct 274782 AATCGCACGGAAGAGCTTG-CTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTA 274724 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 || |||||| || || || | ||| || |||||||| ||||| || || || || | Sbjct 274723 GACTATACATCTCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGG 274664 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 | |||| | ||| || || | ||||| | | ||||| || || || |||| Sbjct 274663 CCTCCGAAACCTGGACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCAT 274604 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCT 93560 ||||||| || || || || | | ||| || || ||||| ||||| ||| | |||| Sbjct 274603 CGGATGCCGCGAAGAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGG 274544 Query 93561 TATCCCAAT--CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618 | ||| | ||| ||||||| ||| | ||| |||||||| | |||||||| || || Sbjct 274543 AGTTCCAGTGACGG--AGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGC 274486 Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678 ||||| || |||||||| ||||| || || | || |||||||| || ||| || || Sbjct 274485 CTCTGCCTTCTTGTACATCTCCCAGATTTCAGGGTACTGAATTGGGAACATGCAGAAGCG 274426 Query 93679 ATTAGGGTT 93687 || |||||| Sbjct 274425 ATCAGGGTT 274417 >seq244 Length=3405668 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/91 (82%), Gaps = 6/91 (7%) Strand=Plus/Minus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA- 126320 || ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 2520981 TAAAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAG 2520924 Query 126321 ---GCGTGGGTTCGAACCCCACACCTGACAA 126348 |||||||||| || ||||| ||||||| Sbjct 2520923 AGGGCGTGGGTTCAAATCCCACTTCTGACAA 2520893 >seq1 Length=8502017 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/95 (82%), Gaps = 7/95 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 8322874 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 8322817 Query 126322 CGTGGGTTCGAACCCCACACCTGACAA-ATTATTA 126355 ||||||||| || ||||| ||||||| ||| ||| Sbjct 8322816 CGTGGGTTCAAATCCCACTTCTGACAATATTTTTA 8322782 >seq98 Length=3145730 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||||| | | ||||| Sbjct 2156724 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCACGTGAGTGAGCG 2156665 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 2156664 TGGGTTCAAATCCCACTTCTGACA 2156641 >seq452 Length=6822880 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 6548415 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 6548358 Query 126328 TTCGAACCCCACACCTGACAAA 126349 ||| || |||||| ||| |||| Sbjct 6548357 TTCAAATCCCACAGCTGTCAAA 6548336 >seq415 Length=3446356 Score = 82.4 bits (90), Expect = 9e-11 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 3204065 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 3204008 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 ||| || |||||| ||| || | ||||| |||||| Sbjct 3204007 TTCAAATCCCACAGCTGTCAGTATGTTATTATTATTTTT 3203969 >seq413 Length=2569514 Score = 82.4 bits (90), Expect = 9e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 2080942 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGG 2080885 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 2080884 GCGTGGGTTCAAATCCCACTTCTGACA 2080858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857194326320