Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq452 111 3e-19 seq415 93.3 9e-14 seq98 93.3 9e-14 seq4 93.3 9e-14 seq2 93.3 9e-14 seq498 91.5 3e-13 seq3 91.5 3e-13 >seq452 Length=6822880 Score = 111 bits (122), Expect = 3e-19 Identities = 200/290 (69%), Gaps = 2/290 (1%) Strand=Plus/Plus Query 218514 CCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTAT 218573 || |||||| || ||||||| ||||||||||| || ||| | || | || || Sbjct 2381171 CCGTGACTTTGTCCACAAGGAACTCATTCTTTTTTCAATTGCAGATCTTCAGAGGTCGAT 2381230 Query 218574 TCCCAGCG-TGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCA 218632 |||| | |||||||||| | || || || || ||||| ||||| | |||| | Sbjct 2381231 -CCCATCTATGGTGGATGGATTGAAACCTGGTCAACGGAAGATACTCTTCTGCTCATTTA 2381289 Query 218633 AGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTT 218692 | | || | || | ||| || || || ||||| ||||||||||| || || || Sbjct 2381290 AAAGAAATTTCATTAAGGAAGCAAAAGTTGCACAGTTCTCTGGTTATGTGTCGGAGCATT 2381349 Query 218693 CTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACT 218752 | | || ||||| || ||||| || || || | || ||||||||||||| || | Sbjct 2381350 CAGCTTATCATCATGGAGAGCAAAGCTTGGCTGGCACTATAATAGGCATGGCACAAGATT 2381409 Query 218753 ATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 ||| ||||| |||||||| ||| | || | || || |||||||||||| Sbjct 2381410 TTGTTGGCAGCAACAACATAAACCTTCTCTTGCCAAATGGTCAGTTTGGT 2381459 >seq415 Length=3446356 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 3037974 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 3037915 Query 142563 CCCCAC 142568 |||||| Sbjct 3037914 CCCCAC 3037909 >seq98 Length=3145730 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 2864362 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2864303 Query 142563 CCCCAC 142568 |||||| Sbjct 2864302 CCCCAC 2864297 >seq4 Length=3848081 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 117132 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 117073 Query 142563 CCCCAC 142568 |||||| Sbjct 117072 CCCCAC 117067 >seq2 Length=6193689 Score = 93.3 bits (102), Expect = 9e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 218582 TGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACC 218641 |||| ||||| | || || || || ||||| ||||| | ||||||| | || Sbjct 618705 TGGTTGATGGTTTGAAACCTGGTCAACGGAAGATACTCTTCTGCTCATTCAAAAGAAATT 618764 Query 218642 TGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACC 218701 | | | ||| || || || ||||| ||||||||||| || || ||||| || | Sbjct 618765 TCATCAAGGAAGCAAAAGTTGCACAGTTCTCTGGTTATGTGTCGGAGCATTCTGCTTATC 618824 Query 218702 ATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCA 218761 |||| || ||||| ||||| | | || ||||||||||||| || | ||| |||| Sbjct 618825 ATCATGGAGAGCAAAGTCTAGCTAGCACTATAATAGGCATGGCACAAGATTTTGTTGGCA 618884 Query 218762 GTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 | |||||||| || | || | || || |||||||||||| Sbjct 618885 GCAACAACATAAATCTTCTCATGCCAAATGGTCAGTTTGGT 618925 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 5811185 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5811126 Query 142563 CCCCAC 142568 |||||| Sbjct 5811125 CCCCAC 5811120 >seq498 Length=700450 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 414089 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 414148 Query 142564 CCCAC 142568 ||||| Sbjct 414149 CCCAC 414153 >seq3 Length=5347415 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 1186414 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1186355 Query 142564 CCCAC 142568 ||||| Sbjct 1186354 CCCAC 1186350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027829978375638