Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq304 98.7 8e-16 seq415 95.1 1e-14 seq3 95.1 1e-14 seq255 91.5 1e-13 seq317 86.0 5e-12 >seq1 Length=8502017 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 ||||| || || | | || | ||| | ||||||||| |||||||||||||| ||| Sbjct 712082 CCGCCTCGGAGACGGAGCACAAGATGGAGCGTAGATTCCTTTTGAATGTTGTAGTCGGCG 712141 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || ||| ||||| || || || ||| |||| | ||||| || || ||||| Sbjct 712142 AGCGTCCGTCCATCCTCAAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGATCGGGAGGG 712201 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||| || | | || | |||||||| || || || Sbjct 712202 ATCCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAAGACTCCACC 712261 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||| || || || || ||||| || || |||||||| Sbjct 712262 TCCAGCGTAATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 712308 >seq304 Length=3547449 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || ||||| || ||| | ||| || |||||| || || || || Sbjct 3199069 GTGGATTCCTTCTGGATGTTATAGTCGGCGAGAGTGCGTCCATCTTCGAGCTGCTTTCCG 3199128 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | ||||| || ||||||||||| ||||| || || |||||| || Sbjct 3199129 GCGAAGATCAACCGCTGCTGATCCGGAGGAATCCCTTCCTTATCCTGAATCTTGGCCTTC 3199188 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| |||||| || |||| || | ||| || || || || ||| Sbjct 3199189 ACATTGTCGATGGTGTCGGAGGATTCCACCTCCAGAGTAATCGTCTTCCCCGTAAGGGTT 3199248 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 3199249 TTCACGAAGATCTGCAT 3199265 >seq415 Length=3446356 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 |||||||| || |||||||||||||| | || || ||||||||| || ||||| Sbjct 2240562 GTAGATTCCTTCTGAATGTTGTAATCTGCGAGGGTGCGCCCATCTTCAAGCTGCTTACCT 2240621 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | || || || || || |||||||| || ||||| ||| || || Sbjct 2240622 GCAAAGATCAACCGTTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGAATTTTGGCCTTG 2240681 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | || || | | ||| || |||| ||| | || || ||||| |||||| Sbjct 2240682 ACGTTGTCTATTGTATCCGAGCTTTCAACCTCCAAGGTGATTGTCTTTCCGGTGAGAGTT 2240741 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 2240742 TTCACAAAAATCTGCAT 2240758 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| || || | || |||||||| || |||||||| ||| Sbjct 2241213 ATGCCTCCACGGAGGCGGAGAACCAAGTGCAAGGTCGATTCTTTCTGGATGTTGTAGTCG 2241272 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| ||| || |||||||| || || |||| || | || || || ||| Sbjct 2241273 GCAAGGGTACGACCATCCTCGAGTTGTTTGCCGGCAAAGATAAGCCTTTGCTGATCTGGA 2241332 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| || | | || | ||||||| || Sbjct 2241333 GGAATCCCCTCCTTGTCCTGGATCTTGGCCTTAACATTGTCGATAGTGTCGGAACTCTCC 2241392 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || ||||| || ||||||||||| Sbjct 2241393 ACCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACGAAAATCTGCAT 2241442 >seq3 Length=5347415 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| || ||| | |||||| || || || || Sbjct 3172166 GTGGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCTGCCATCTTCCAGCTGCTTCCCG 3172225 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| | ||| |||||||| || || || |||||||| ||||||| || Sbjct 3172226 GCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCCTCTTTGTCCTGAATCTTTGCCTTC 3172285 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | | || || |||| ||| | ||||| || || ||||| Sbjct 3172286 ACGTTGTCTATGGTGTCCGAGCTCTCCACCTCCAAGGTGATTGTTTTCCCAGTGAGAGTC 3172345 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 3172346 TTCACGAAGATCTGCAT 3172362 >seq255 Length=3424836 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||| ||||| || |||||| ||||||||| || || ||| Sbjct 2253228 GTGGACTCCTTCTGGATGTTATAATCCGCCAGGGTACGACCATCTTCAAGCTGCTTTCCA 2253287 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | ||||| | ||| ||||| || || || || || ||||| |||||| || Sbjct 2253288 GCAAAAATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTTGCCTTG 2253347 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| | ||||| |||| || | || ||||| || || || Sbjct 2253348 ACATTGTCGATGGTGTCGGAGCTCTCGACCTCCAGAGTAATGGTCTTGCCTGTGAGGGTC 2253407 Query 114366 TTTACAAAAATCTGCATG 114383 || || |||||||||||| Sbjct 2253408 TTCACGAAAATCTGCATG 2253425 >seq317 Length=1979591 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 ||||| || || | | || | ||| | ||| ||||| || ||||||||||| ||| Sbjct 618323 CCGCCGCGGAGGCGGAGGACCAGATGCAGCGTTGATTCCTTCTGAATGTTGTAGTCGGCG 618264 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || ||| ||||| || || || ||| | || | || || || |||||||| Sbjct 618263 AGCGTGCGCCCATCCTCAAGCTGCTTCCCGGCGAATATCAACCGTTGCTGATCCGGAGGG 618204 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||| || | | || | ||||||| ||| || || Sbjct 618203 ATACCTTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATAGTGTCGGAGGACTCTACC 618144 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||| || || || || ||||| || || |||||||| Sbjct 618143 TCTAGCGTAATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 618097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131747639016