Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq414 188 1e-42 >seq414 Length=5667865 Score = 188 bits (208), Expect = 1e-42 Identities = 382/560 (68%), Gaps = 13/560 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||| || | |||| |||||| || |||||| | || ||| Sbjct 3472937 ATCTGGGAGATGTACAAGAAAGCAGAAGCCTCCTTCTGGACGGCGGAGGAGGTCGATCTG 3472996 Query 42360 GC-CAAGGACACGGCCGGCTGGGAGTCACTG---TCTGAGAACGAAAAGTTTTTCCTCAA 42415 | |||| | || | |||| | || ||| ||||| ||||||| |||| |||| Sbjct 3472997 TCTCAAGATCTCGCTCA-CTGGTACTCTCTGACGTCTGA---CGAAAAGCATTTCATCAA 3473052 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 | | || || || || ||||||||||| ||||| || || || || || || |||| Sbjct 3473053 ACATATTCTAGCTTTTTTCGCCGCCTCCGACGGGATCGTGCTCGAAAATCTCGCTGCCAG 3473112 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||||||||| ||||| ||| | ||||| ||| || |||||||||||||| || || Sbjct 3473113 GTTCATGAAGGAGGTCCAGGTTTCGGAGGCTCGCGCGTTTTACGGCTTCCAGATTGCAAT 3473172 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 || ||| | ||||||||| |||| || | | || |||||| |||| | | Sbjct 3473173 TGAAAACATCCACTCTGAGATGTATAGTCTTCTATTGGAAACTTACATCAAGGATTCTGA 3473232 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 || | | |||| ||| || || || || | || || || ||||||||||| Sbjct 3473233 AGAAAAGAGCAGGCTCTTCCGTGCTATTGAAACCGTTCCTTGTGTCGAGAAGAAGGCGAC 3473292 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 ||||| || |||||||| || | || |||||| |||||||| | || || Sbjct 3473293 TTGGGCCCTTCGTTGGATCGATGGTTCTGA---GTCGTTCGCAGAGAGGCTACTGGCTTT 3473349 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 | || ||| || || || || |||||||| |||| | || |||||| | || | Sbjct 3473350 TGCCTGCGTGGAAGGTATATTTTTCTCGGGAAGCTTCTGTGCAATATTCTGGTTGAAAAA 3473409 Query 42776 GAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 | ||| ||| ||||||||| | |||||||| || || ||||| | |||| ||||| Sbjct 3473410 G-AGGGGTCTGATGCCCGGGTTGACCTTCTCCAATGAGCTCATTTCCCGGGATGAGGGTT 3473468 Query 42835 TGCATAGGGACTTTGCCTGC 42854 | ||| | ||||| || ||| Sbjct 3473469 TACATTGTGACTTCGCTTGC 3473488 Score = 123 bits (136), Expect = 5e-23 Identities = 350/533 (66%), Gaps = 11/533 (2%) Strand=Plus/Plus Query 42289 AGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGG 42348 || ||| || |||||| |||||||||||||| || ||| ||||| || || | Sbjct 274448 AGTACCCTGAAATCTGGGAGATGTACAAGAAGGCAGAGGCTTCCTTTTGGACGGCGGAAG 274507 Query 42349 AGATTGACCTGGC-CAAGGACACGGCCGGCTGGGAGTCACTG---TCTGAGAACGAAAAG 42404 | |||| | | |||| | | | | |||| | || || ||||| ||| ||| Sbjct 274508 AAGTTGATTTATCACAAGATCTCCGTCA-CTGGAACTCCCTTACATCTGA---CGAGAAG 274563 Query 42405 TTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAAC 42464 |||| ||||| | | || ||||||||||| || || || || || || ||||| Sbjct 274564 CATTTCATCAAACATGTTCTAGCCTTCTTCGCGGCATCCGATGGAATCGTTCTCGAGAAT 274623 Query 42465 CTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTC 42524 ||||| |||| |||||||| ||||| ||| | ||||| | || || || ||| Sbjct 274624 CTGGCTGCCAGATTCATGAAGGAGGTCCAGGTTTCGGAGGCCAGGGCGTTTTATGGTTTC 274683 Query 42525 CAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATC 42584 ||||| || || || || | ||||| ||| |||| ||| | | || |||||| Sbjct 274684 CAGATTGCAATTGAAAATATTCACTCAGAGATGTATAGTCTACTTTTGGAAACATACATC 274743 Query 42585 CTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAG 42644 |||| | | ||| | | ||| ||| || || || || | || || || | Sbjct 274744 AAGGATTCTGAAGAGAAGAGCAAGCTCTTCCGTGCGATTGAAACCGTTCCGTGTGTCGAA 274803 Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGG 42704 ||||||||| | ||||| || |||||||||| || | || | || |||||| Sbjct 274804 AAGAAGGCGAATTGGGCCCTTCGCTGGATCGAGGGTTCTGA---GTCTTTTCCAGAGAGG 274860 Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || | |||||| | ||||| ||||| || ||||| || |||| | | || ||| Sbjct 274861 CTACTCGCCTTTGCTTGTGTCGAAGGCATATTTTTCTCCGGAAGCTTCTGCGCTATATTC 274920 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCAT 42817 ||| | || | | || | |||||| || | |||||||| || |||||||| Sbjct 274921 TGGTTGAAAAAAAGGGGCTTGATGCCTGGTTTGACCTTCTCCAATGAACTCAT 274973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333085403680