Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12]
518 sequences; 100,688,548 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq255 104 2e-17
seq3 96.9 3e-15
seq415 89.7 4e-13
seq1 89.7 4e-13
>seq255
Length=3424836
Score = 104 bits (114), Expect = 2e-17
Identities = 165/236 (70%), Gaps = 18/236 (8%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||| ||||||| ||||||| || ||||||||||||||||| || ||||| || ||
Sbjct 2252970 CCTCCCCTCAGCCTGAGCACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAGTCAGCG 2253029
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| ||| | || |||| ||||| |||||||| || || | |||||||||| ||
Sbjct 2253030 AGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGGGGG 2253089
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTC---G 34077
| | ||| |||||| | ||||||||| ||||| | || | | || |
Sbjct 2253090 ATTCCCTCCTTGTCC-TGGATTTTTGCTT--------TCACATTGTCGATGGTGTCGGAG 2253140
Query 34078 CATTCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
| ||||||| || || ||||| ||||| || || |||||||| || |||||
Sbjct 2253141 CTTTCGACCTCCAAAGTGATGGTTTTCCCGGTGAGGGTCTTCACAAAAATCTGCAT 2253196
>seq3
Length=5347415
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| |||||||||| || |||| || || |||||||||||||| |||||||| || |||
Sbjct 3172364 CCACCTCTCAGCCTTAGGACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCC 3172423
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
||| ||| |||| |||| ||||| || ||||| |||| | |||||| ||| ||
Sbjct 3172424 AATGTGCGCCCGTCCTCCAGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 3172483
Query 34021 ACGCTCTCTTTGTCCATAATTTT 34043
| || || || ||| ||||||
Sbjct 3172484 ATGCCTTCCTTATCCTGAATTTT 3172506
>seq415
Length=3446356
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| |||||||| || || || | || || ||||||||||| || |||||||| || |||
Sbjct 2240304 CCACCTCTCAGGCGGAGGACTAAGTGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGCC 2240363
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
|| ||| |||| || | |||||||||||||| |||| | ||||||||||
Sbjct 2240364 AAGGTGCGCCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCC 2240417
>seq1
Length=8502017
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || ||||||| || |||| || || |||||||||||||| |||||||||||||||
Sbjct 7226612 CCACCCCTCAGCCTGAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCTGCC 7226553
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| ||| |||| || | ||||| ||||| || |||| | ||||||||| ||
Sbjct 7226552 AGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAATCTCTGCTGATCTGGGGGG 7226493
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGAT-TCGCA 34079
| || ||| || ||| ||||| ||| | | | | || | || | |||
Sbjct 7226492 ATGCCCTCCTTATCCTGGATTTTCGCCTTCACGTTGTCGATGGTGTCTG-AGCTCTCGAC 7226434
Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| | || || ||||| ||||| || || ||||||||||| |||||
Sbjct 7226433 CTCTAGAGTGATGGTTTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 7226386
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||| || |||| || ||| || || || || ||||||||||||||||||||| |||
Sbjct 6606786 CCTCCCCTGAGCCTCAACACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCGGCC 6606845
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
| | | | || ||||| |||||||| |||||||||| | |||||||||
Sbjct 6606846 AGCGTCCTCCCATCTTCCAACTGCTTGCCAGCAAATATCAACCTCTGCTGATC 6606898
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || ||||||| || |||| || || |||||||||||||| |||||||| || ||
Sbjct 7226385 ACCACCCCTCAGCCTGAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 7226326
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
| || |||| || | ||||| |||||||| || || |||||||| || ||
Sbjct 7226325 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCGCTGCTGGTCTGGGGG 7226266
Query 34020 CACGCTCTCTTTGTC 34034
| || |||||||||
Sbjct 7226265 GATGCCCTCTTTGTC 7226251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397059893295436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |