Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq414 134 2e-26 seq412 89.7 6e-13 >seq414 Length=5667865 Score = 134 bits (148), Expect = 2e-26 Identities = 527/817 (65%), Gaps = 29/817 (4%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || ||||| ||| |||||||||| ||||||||||| | |||||| || ||||| Sbjct 3473773 GTACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGTTCCAT 3473714 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 | || || ||||||| || || | | || ||| |||||||| | | Sbjct 3473713 CCAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGT-ACCCCAATGCAACCAACAAT- 3473656 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 | ||||| ||| |||| ||||| | ||||| ||| || ||||| || | || | Sbjct 3473655 CTATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGCCTG 3473596 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || | ||| || | | ||| || | ||||| ||||| || ||| ||||| || Sbjct 3473595 CACGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGAGCCCG 3473536 Query 125996 TGAATGGTGTCCACCCCAGGTCTA---TTGCGCAAAGTCTTGAAGAGTTCCACG---GCA 126049 || | || || | | | | | || ||| | | | |||| || | || Sbjct 3473535 TGCACCGTTTCTTCACTAAGCTTCACTTTAAGCAGACTAT---AGAG---CAAGCAAGCG 3473482 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || || | |||||| || ||||| ||||| ||||| |||||| || || ||| Sbjct 3473481 AAGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGC 3473422 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 || ||||||| ||| ||||||||||| || ||||| || |||||||| || || || Sbjct 3473421 ATCAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAATATACCT 3473362 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA-GCGCGACTTTGTGTCAAACCA 126228 ||||| || || || || | || | ||| || || || | || | || ||| | Sbjct 3473361 TCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAACGACTCAGAACCATCGATCCAACGA 3473302 Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 | ||||| |||||| ||||||| ||| || ||||| | || || ||||| Sbjct 3473301 ----AGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGAG 3473246 Query 126289 TTCCT--TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 126346 ||| |||||||| | ||| |||||||| | || | || ||| | || Sbjct 3473245 --CCTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCA 3473188 Query 126347 CCGTGGACCATTTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404 ||||| ||||| || ||| ||| | |||| || | ||| || || | || Sbjct 3473187 GAGTGGATGTTTTCA--ATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCT 3473130 Query 126405 GTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 126464 | ||||| | || || | || ||| || | || || || ||||| | || | Sbjct 3473129 GGACCTCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGA 3473070 Query 126465 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGT 126524 |||| || || |||| || ||||| | || ||| | |||| | | ||||| Sbjct 3473069 AAAAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAG 3473010 Query 126525 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 | ||||| | || ||||| ||||||||||| ||||| Sbjct 3473009 CGAGATCTTGAGACAGATCGACCTCCTCCGCCGTCCA 3472973 Score = 93.3 bits (102), Expect = 5e-14 Identities = 177/260 (68%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 |||||||| || ||||| || ||||||||||| |||||| || || ||||| | ||| Sbjct 274994 TGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAGGCATCAAGCCC 274935 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 | || ||||||||||| || || || || || ||||| || || || || ||||| Sbjct 274934 CTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAGAAAAATATGCCTTCGACACAA 274875 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || || | || | ||| | ||| || || || | ||| | ||| Sbjct 274874 GCAAAGGCGAGTAGCCTCTCTGGAAAAGACTCAGA---ACCCTCGATCCAGCGAAGGGCC 274818 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTT 126298 || | |||||| || |||| |||||| ||||| | ||||| ||||| | |||| Sbjct 274817 CAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAGAGCTTGCTCTTC 274758 Query 126299 TCTGATGGATCTTTGATGTA 126318 ||| | ||| |||||||| Sbjct 274757 TCTTCAGAATCCTTGATGTA 274738 Score = 86.0 bits (94), Expect = 7e-12 Identities = 189/279 (68%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 10877 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCGG 10934 || |||||||| ||||| || || |||||||| || || || ||||||||||| | | Sbjct 2159310 AATCCATCCATTTCAGTTAATAGCTGATTGATAGTCTGCTCTCGTTCATCATTTCCACCA 2159369 Query 10935 GCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATAC 10994 || | || || | |||||| | || || || ||||||||||| || || || || | Sbjct 2159370 CCAAGC--CCAGCTCCTCGTTGCCTTCCCACAGCATCAATTTCATCAATAAAGACAATGC 2159427 Query 10995 ACGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCC 11053 | || | || || ||| ||||| | ||| | ||||| ||| || |||||| Sbjct 2159428 AAGG-GGCCTTGGACTTGGCTTTCTCAAACAAATCCCTTACTCTTGAGGCTCCAACACCC 2159486 Query 11054 ACAAACATTTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCC 11113 ||||||| |||||||| | | || | || || || || || | ||| || Sbjct 2159487 ACAAACAGCTCCACAAATTCTGAAGCTGCGCAGGAGAAAAATGGAACACCTGCTTCTCCG 2159546 Query 11114 GCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGT 11152 || | || | ||| || |||||||| ||||| || ||| Sbjct 2159547 GCCACTGCCCTGGCCAGAAGGGTCTTTCCCGTTCCTGGT 2159585 >seq412 Length=943016 Score = 89.7 bits (98), Expect = 6e-13 Identities = 191/283 (67%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 10789 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 10848 |||||| | || || | ||||| || || |||||||| || || || || || Sbjct 350336 ATCAAACCTTCCAGGCCTCAGGAGTGCAGAATCCAGGATATCTGCACGATTGGTTGCAGC 350277 Query 10849 GATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 10908 ||||| | |||||| || | || ||||||||||||||||| | |||||| || | Sbjct 350276 AATGACGATGATGCCGGTGTTCCCTTCGAAGCCATCCATCTCAGTTAGGAGTTGGTTCAG 350217 Query 10909 GGTTTGTTCGCGTTCATCATTCGCGGGCATACCACCCGCACTGCGTTGCTTACCGACGGC 10968 || ||||| | |||||| ||| | | ||| | | | ||| ||| || || Sbjct 350216 AGTCTGTTCCCTTTCATCGTTCCCCCCTCCAATACCAGTTCCCCTTTGACGACCCACAGC 350157 Query 10969 GTCAATTTCATCGATGAAAACGATACA-CGGTTGATTTTCACGGGCAACTTCAAAGATAT 11027 |||||||| || | || ||||| || || | ||| | | | ||| ||| | || Sbjct 350156 ATCAATTTCGTCCACAAAGACGATGCAGGGGGCGTTTTCCTTTGCCTTCTTGAAA-AGAT 350098 Query 11028 CTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAA 11070 | |||||||| ||||| || |||||||||||||| ||||| Sbjct 350097 CACGGACTCTGGAAGCACCAACTCCCACAAACATTTCGACAAA 350055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349732135440