Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 seq482 114 1e-20 seq255 113 5e-20 seq3 113 5e-20 seq415 86.0 7e-12 >seq1 Length=8502017 Score = 116 bits (128), Expect = 4e-21 Identities = 156/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||||||||||| || || |||||||| ||||| || ||| |||| || Sbjct 7226594 ACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGCCCGTCCTCG 7226535 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || | || |||||| || | || | || |||||| ||| | Sbjct 7226534 AGCTGCTTCCCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATGCCCTCCTTATCCTGG 7226475 Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 ||||| || | ||| | | | ||||| |||| || || || | |||||||| Sbjct 7226474 ATTTTCGCCTTCA-CGTTGTCGATGGTGTCTGAGCTC---TCGACCTCTAGAGTGATGGT 7226419 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || || ||||| |||||||| ||||| Sbjct 7226418 TTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 7226386 Score = 113 bits (124), Expect = 5e-20 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||||||||||| || || ||||| ||||| || || || |||| || Sbjct 7226366 ACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCG 7226307 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || || || ||||| ||||||||||| | || | || ||| ||||| | Sbjct 7226306 AGCTGCTTTCCGGCAAAGATGAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 7226247 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || || ||||| | | | ||||| ||| ||| || || | |||||||| Sbjct 7226246 ATCTTCGCTTTGACGTTATCGATAGTGTCCGAGCT---TTCAACCTCAAGGGTGATGGTC 7226190 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || ||||| |||||||| ||||| Sbjct 7226189 TTACCCGTGAGGGTCTTCACAAAGATCTGCAT 7226158 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| ||||| || || || ||||| | || || |||||||| || ||||| Sbjct 712118 TCCTTTTGAATGTTGTAGTCGGCGAGCGTCCGTCCATCCTCAAGCTGCTTCCCGGCGAAG 712177 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | |||||||| |||| || | | ||||||||| ||| | || | | ||| Sbjct 712178 ATCAACCGCTGCTGATCGGGAGGGATCCCTTCCTTGTCC-TGAATCTTGGCCTTCACGTT 712236 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| || ||||| || | ||| || || || |||||||| || || || Sbjct 712237 GTCGATGGTGTCGGAAGACTCCACCTCCAGCGTAATCGTCTTCCCCGTTAGGGTTTTCAC 712296 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 712297 GAAGATCTGCAT 712308 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||| || |||| | || || |||||||| ||||| || Sbjct 7226804 TCCTTCTGGATGTTGTAATCAGCAAGGGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAG 7226745 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | | |||||| || | || | | |||||||||| |||||| || | ||| Sbjct 7226744 ATCAACCTCTGCTGATCTGGAGGAATCCCCTCCTTGTCCTGGATTTTCGCCTTCA-CGTT 7226686 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| ||||| || | |||||||| || || || || ||||| Sbjct 7226685 GTCGATGGTGTCTGAGCTC---TCCACCTCCAGGGTGATGGTCTTTCCGGTGAGGGTCTT 7226629 Query 42194 TACAAAGATTTGCATT 42209 || || || |||||| Sbjct 7226628 GACGAAAATCTGCATT 7226613 >seq482 Length=739299 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||| ||||| ||| ||||| ||||||||||||||||| ||||| || | || || Sbjct 127944 ACCAGATGCAGTGTAGATTCCTTCTGAATATTGTAATCAGCAAGAGTACGTCCATCTTCA 128003 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || | |||||||| || | || | | ||||||||| || Sbjct 128004 AGCTGCTTCCCGGCGAAGATTAACCGCTGCTGATCCGGAGGGATCCCTTCCTTGTCC-TG 128062 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | || | |||| | | | ||||| || ||||| || | ||| || || || Sbjct 128063 AATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCCACCTCCAGCGTAATCGTCTT 128122 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCACGCCG 42218 ||||| || ||||| |||||||| ||||| |||||| || Sbjct 128123 ACCCGTGAGGGTCTTCACAAAGATCTGCATCTTCACGGCG 128162 >seq255 Length=3424836 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| || | ||||||||||| || |||||||| ||||| || || ||| | || || Sbjct 2252987 CACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAGTCAGCGAGGGTGCGCCCATCCTC 2253046 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| || || || || || | |||||| || | || | | |||||||||| Sbjct 2253047 CAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTG 2253106 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 ||||||| ||| | | | | |||||| ||| || || | ||||||||||| Sbjct 2253107 GATTTTTGCTTTCACATTGTCGATGGTGTCGGAGCTTTCGACCTCCAAAGTGATGGTTTT 2253166 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || ||||| ||||| || ||||| Sbjct 2253167 CCCGGTGAGGGTCTTCACAAAAATCTGCAT 2253196 >seq3 Length=5347415 Score = 113 bits (124), Expect = 5e-20 Identities = 155/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||||||||||| || || ||||| ||||||| || ||| |||| || Sbjct 3172382 ACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGCCCGTCCTCC 3172441 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || || || || | | ||||||||| | ||| | || ||||| ||| || Sbjct 3172442 AGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATGCCTTCCTTATCC-TG 3172500 Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 | |||| | | ||| | | | ||||| |||| || || |||| || ||||| Sbjct 3172501 AATTTTAGCCTTCACGTTGTCGATGGTGTCCGAGCTC---TCTACTTCGAGGGTAATGGT 3172557 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| ||||| ||||| |||||||| ||||| Sbjct 3172558 CTTGCCAGTTAGAGTCTTGACAAAGATCTGCAT 3172590 Score = 102 bits (112), Expect = 9e-17 Identities = 143/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||||||||||| ||||| | || || |||||||| || ||||| Sbjct 3172171 CTCCTTCTGGATGTTGTAATCAGCCAAAGTCCTGCCATCTTCCAGCTGCTTCCCGGCGAA 3172230 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||| | || | | ||| |||||| ||| | |||| | ||| Sbjct 3172231 GATGAGCCTCTGCTGGTCCGGGGGGATCCCCTCTTTGTCC-TGAATCTTTGCCTTCACGT 3172289 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| ||||| || | ||||| ||||| || || || |||| Sbjct 3172290 TGTCTATGGTGTCCGAGCTC---TCCACCTCCAAGGTGATTGTTTTCCCAGTGAGAGTCT 3172346 Query 42193 TTACAAAGATTTGCATT 42209 | || ||||| |||||| Sbjct 3172347 TCACGAAGATCTGCATT 3172363 >seq415 Length=3446356 Score = 86.0 bits (94), Expect = 7e-12 Identities = 142/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 |||||||||||||| || ||||| || |||| || ||| |||| || |||||||| || Sbjct 2240334 GTGCTCTCCTTTTGGATGTTGTAGTCCGCCAAGGTGCGCCCGTCCTCAAGCTGCTTGCCG 2240393 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 42130 || || || | | |||||| || | || | | |||||| ||| ||| | || | || Sbjct 2240394 GCAAAGATCAACCTCTGCTGATCCGGGGGGATTCCCTCCTTATCC-TGAATCTTCGCCTT 2240452 Query 42131 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187 | | | | ||| || ||| ||| || || | ||||||||||| || || || Sbjct 2240453 CACATTGTCGATCGTATCCGAGCT---TTCGACCTCAAGGGTGATGGTTTTCCCTGTGAG 2240509 Query 42188 CGTCTTTACAAAGATTTGCAT 42208 ||||| |||||||| ||||| Sbjct 2240510 AGTCTTGACAAAGATCTGCAT 2240530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543209282697120