Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 seq482 96.9 3e-15 seq317 95.1 1e-14 seq415 91.5 1e-13 seq3 87.8 2e-12 seq255 84.2 2e-11 >seq1 Length=8502017 Score = 107 bits (118), Expect = 2e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||||||||| | ||| | || | ||| | | || ||||||||||||||||||||| Sbjct 712081 GCCGCCTCGGAGACGGAGCACAAGATGGAGCGTAGATTCCTTTTGAATGTTGTAGTCGGC 712140 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||| || || || |||| |||| | ||||| || || ||||| Sbjct 712141 GAGCGTCCGTCCATCCTCAAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGATCGGGAGG 712200 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || ||||| ||||| ||| | || | || | ||| || | |||||||| |||||| Sbjct 712201 GATCCCTTCCTTGTC-CTGAATCTTGGCCTTCACGTTG-TCGATGGTGTCGGAAGACTCC 712258 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | ||| | ||| || || || || ||||| || || |||||||| Sbjct 712259 ACCTCCAGCGTAATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 712308 >seq482 Length=739299 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||| ||||| || | |||||| || || || || || |||| Sbjct 127959 GATTCCTTCTGAATATTGTAATCAGCAAGAGTACGTCCATCTTCAAGCTGCTTCCCGGCG 128018 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||||| ||||| || |||||||| || ||||| ||||| ||| | || | || | Sbjct 128019 AAGATTAACCGCTGCTGATCCGGAGGGATCCCTTCCTTGTCC-TGAATCTTGGCCTTGAC 128077 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | |||||| | ||||||||||| | ||| | ||| ||||| || || || | Sbjct 128078 ATTGT-CAATGGTGTCCGAGGACTCCACCTCCAGCGTAATCGTCTTACCCGTGAGGGTCT 128136 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 128137 TCACAAAGATCTGCAT 128152 >seq317 Length=1979591 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| ||||||||||||||| | || ||| ||||| || || || |||| Sbjct 618292 TTGATTCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGCCCATCCTCAAGCTGCTTCCCGG 618233 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | || | || || || |||||||| |||||||| ||||| ||| | || | || Sbjct 618232 CGAATATCAACCGTTGCTGATCCGGAGGGATACCTTCCTTGTC-CTGAATCTTCGCCTTC 618174 Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||| || | ||||||| ||||| ||||| | ||| | ||| || || || || || Sbjct 618173 ACGTTG-TCGATAGTGTCGGAGGACTCTACCTCTAGCGTAATCGTCTTCCCCGTAAGGGT 618115 Query 138597 TTTTACAAAAATCTGCAT 138614 ||| || || |||||||| Sbjct 618114 TTTCACGAAGATCTGCAT 618097 >seq415 Length=3446356 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | || | ||| || || | | | || || || || |||||||||||| Sbjct 2241215 GCCTCCACGGAGGCGGAGAACCAAGTGCAAGGTCGATTCTTTCTGGATGTTGTAGTCGGC 2241274 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| |||||||||||||| |||| | |||| || | || || || ||||| Sbjct 2241275 AAGGGTACGACCATCCTCGAGTTGTTTGCCGGCAAAGATAAGCCTTTGCTGATCTGGAGG 2241334 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || || | |||| || | ||||||| ||||| Sbjct 2241335 AATCCCCTCCTTGTCCTGGATCTTGGCCTTAACATTG-TCGATAGTGTCGGAACTCTCCA 2241393 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || || || || ||||| || ||||||||||| Sbjct 2241394 CCTCGAGGGTGATAGTCTTGCCTGTGAGGGTTTTCACGAAAATCTGCAT 2241442 Score = 82.4 bits (90), Expect = 8e-11 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | |||| || || || ||||||||||| Sbjct 2240988 CCACCACGGAGACGGAGGACCAAGTGCAAGGTTGATTCTTTCTGGATGTTGTAGTCTGCG 2241047 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || ||||||| | |||| || | ||| |||||||| || Sbjct 2241048 AGGGTGCGGCCATCCTCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGGGGG 2241107 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | |||| ||| || | ||||| | ||| | Sbjct 2241108 ATTCCTTCCTTGTC-CTGAATCTTGGCCTTAACGTTG-TCAATAGTGTCCGAGCTCTCAA 2241165 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 | || | || | || || || || ||||| || ||||| ||||||||| || Sbjct 2241166 CTTCAAGGGTTATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCATGCCT 2241218 >seq3 Length=5347415 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||||||| | ||||| ||||||||||| || |||| | Sbjct 3172853 GATTCTTTCTGGATGTTGTAGTCGGCAAGGGTACGACCATCCTCGAGTTGCTTGCCGGCA 3172912 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || || | || || ||||| || || ||||| ||||| ||| || ||| | | Sbjct 3172913 AAAATCAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCTTTAACA 3172972 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| |||||||||| || | ||||| || || || ||||| Sbjct 3172973 TTG-TCAATGGTGTCGGAACTTTCCACCTCGAGGGTGATTGTTTTTCCTGTGAGGGTTTT 3173031 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 3173032 CACGAAGATCTGCAT 3173046 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||| || || ||| |||||| || || || || | | | Sbjct 3172399 CTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGCCCGTCCTCCAGCTGCTTTCCTGCAAA 3172458 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| | | ||| |||||||| || || ||||| || || ||| |||| | || | | Sbjct 3172459 GATCAACCTCTGCTGGTCCGGTGGGATGCCTTCCTTATC-CTGAATTTTAGCCTTCACGT 3172517 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | ||| || |||| || | || || ||||| ||||| || Sbjct 3172518 TG-TCGATGGTGTCCGAGCTCTCTACTTCGAGGGTAATGGTCTTGCCAGTTAGAGTCTTG 3172576 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 3172577 ACAAAGATCTGCAT 3172590 >seq255 Length=3424836 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || || |||||||| | || ||| ||||| || || || |||| | | Sbjct 2253005 CTCCTTCTGGATATTGTAGTCAGCGAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCAAA 2253064 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| || | ||| || ||||| || || || || ||||| ||||||| ||| | ||| Sbjct 2253065 GATAAGCCTCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATTTTTGCTTTCACATT 2253124 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | | |||||||| || ||||| | || | ||||| || || || || || | Sbjct 2253125 GT-CGATGGTGTCGGAGCTTTCGACCTCCAAAGTGATGGTTTTCCCGGTGAGGGTCTTCA 2253183 Query 138602 CAAAAATCTGCAT 138614 ||||||||||||| Sbjct 2253184 CAAAAATCTGCAT 2253196 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| | ||| | | |||||||||| ||||||||||||||| Sbjct 2253654 CCACCACGCAGACGGAGAACAAGATGCAGGGTTGACTCCTTCTGAATGTTGTAGTCGGCG 2253713 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || ||||| || | |||| || | || |||| ||| || Sbjct 2253714 AGGGTGCGGCCGTCTTCCAGCTGTTTTCCTGCGAAGATAAGTCTTTGCTGGT-CGGGGGG 2253772 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || || | | || | ||| |||| |||||| Sbjct 2253773 ATTCCTTCCTTATCCTGGATCTTAGCCTTGACGTTGTCGATGGTATCGGAGCTTTCCACC 2253832 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || |||||||| ||||| |||||||| Sbjct 2253833 TCAAGGGTGATTGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 2253879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259186700960