Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq317 114 1e-20 seq1 109 5e-19 seq3 104 2e-17 seq255 95.1 1e-14 >seq317 Length=1979591 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 ||| |||||||| | | || |||||||||||||||||||| || || || || ||| Sbjct 618324 TCCGCCGCGGAGGCGGAGGACCAGATGCAGCGTTGATTCCTTCTGAATGTTGTAGTCGGC 618265 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 || || ||| || | || || || ||| ||||||| |||||||| ||||| || Sbjct 618264 GAGCGTGCGCCCATCCTCAAGCTGCTTCCCGGCGAATATCAACCGTTGCTGATCCGGAGG 618205 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGA 45291 || ||||| || || ||||| || || | || | || | |||||||| ||||| | Sbjct 618204 GATACCTTCCTTGTCCTGAATCTTCGCCTTCA-CGTTGTCGATAGTGTCGGAGGACTCTA 618146 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 | || || |||| ||| || || || || ||||| || || || |||||| Sbjct 618145 CCTCTAGCGTAATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCATC 618096 >seq1 Length=8502017 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||| ||||| ||||| ||||||||||| || || || ||| | Sbjct 712082 CCGCCTCGGAGACGGAGCACAAGATGGAGCGTAGATTCCTTTTGAATGTTGTAGTCGGCG 712141 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || ||| || | || || || ||| | ||||| || ||||| || || || Sbjct 712142 AGCGTCCGTCCATCCTCAAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGATCGGGAGGG 712201 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || ||||| || || ||||| || || | || | || | ||||||||||||||| || Sbjct 712202 ATCCCTTCCTTGTCCTGAATCTTGGCCTTCA-CGTTGTCGATGGTGTCGGAAGACTCCAC 712260 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || |||| ||| || || ||||| ||||| || || || |||||| Sbjct 712261 CTCCAGCGTAATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 712309 >seq3 Length=5347415 Score = 104 bits (114), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||| || |||||||| | ||||| | ||||||||||| || |||||||| ||| Sbjct 3172436 TCCTCCAGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATGCCTTCCTTA 3172495 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || |||||||| || | || | || | |||||| || ||| |||||||| |||| Sbjct 3172496 TCCTGAATTTTAGCCTTCA-CGTTGTCGATGGTGTCCGAGCTCTCTACTTCGAGGGTAAT 3172554 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| |||||||| || ||||| || ||||| Sbjct 3172555 GGTCTTGCCAGTTAGAGTCTTGACAAAGATCTGCAT 3172590 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || | || ||||| || ||||||||||| ||||||||| Sbjct 3172589 ATACCACCGCGGAGGCGGAGGACCAAGTGGAGCGTGGACTCCTTTTGGATGTTATAATCG 3172648 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | || || || ||| | || | || |||||||| || Sbjct 3172649 GCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGGTCTGGG 3172708 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| ||||| || || || |||| || | || | |||||| || ||| Sbjct 3172709 GGGATTCCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAGCTCTC 3172767 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | || ||||| |||||||| || ||||| || ||||| Sbjct 3172768 CACTTCAAGAGTTATGGTCTTGCCAGTTAGAGTCTTGACAAAGATCTGCAT 3172818 >seq255 Length=3424836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || |||||||| ||||| ||||| || || || || ||| || ||| || ||| Sbjct 2253672 ACAAGATGCAGGGTTGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCC 2253731 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | |||||||||||| | || | || |||||||| ||| || || ||||| ||||| || Sbjct 2253732 AGCTGTTTTCCTGCGAAGATAAGTCTTTGCTGGT-CGGGGGGATTCCTTCCTTATCCTGG 2253790 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||| ||||| || || || || || | || || Sbjct 2253791 ATCTTAGCCTTGA-CGTTGTCGATGGTATCGGAGCTTTCCACCTCAAGGGTGATTGTCTT 2253849 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| |||||||| ||||| || |||||| Sbjct 2253850 TCCGGTAAGAGTTTTCACAAAGATCTGCATC 2253880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000273279280