Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq414 129 7e-25 seq412 91.5 2e-13 >seq414 Length=5667865 Score = 129 bits (142), Expect = 7e-25 Identities = 561/874 (64%), Gaps = 25/874 (3%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || || ||| |||||||||| ||||||||||| | | ||| || ||||| Sbjct 3473773 GTACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGTTCCAT 3473714 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 | || || ||||||| || || | | || ||| |||||||| | | Sbjct 3473713 CCAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGT-ACCCCAATGCAACCAACAAT- 3473656 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 | ||||| ||| |||| ||||| | ||||| ||| || ||||| || | || | Sbjct 3473655 CTATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGCCTG 3473596 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || | ||| || | | ||| || | ||||| ||||| || ||| |||| || Sbjct 3473595 CACGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGAGCCCG 3473536 Query 127469 TGAATAGTGTCCACCCCAGG--TCTATTGCGTAA--AGTCTTGAAGAGTTCCACAGCAAA 127524 || | || || | | | | || || ||| || || | ||| ||| || Sbjct 3473535 TGCACCGTTTCTTCACTAAGCTTCACTT---TAAGCAGACTATA-GAGCAAGCAAGCGAA 3473480 Query 127525 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 127584 || || | |||||| || ||||| ||||| ||||| |||||| || || ||||| Sbjct 3473479 GTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGCAT 3473420 Query 127585 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 127644 ||||||| ||| ||||||||||| || ||||| || || ||||| || || || || Sbjct 3473419 CAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAATATACCTTC 3473360 Query 127645 CACACACGCGAACGCAAATAGACGCTCGGCAAAGGA-GCGGGACTTTGTATCAAACCACT 127703 ||| || || || || | ||| | ||| || || || | | || | ||| ||| | Sbjct 3473359 CACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAACGACTCAGAACCATCGATCCAACGA-- 3473302 Query 127704 TCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTT 127763 | ||||| ||||| ||||||| ||| || ||||| | || || ||||| Sbjct 3473301 --AGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGAG-- 3473246 Query 127764 CCT--TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 127821 ||| |||||||| | ||| |||||||| | || | || ||| | || Sbjct 3473245 CCTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCAGA 3473186 Query 127822 GTGGACCATTTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 127879 ||||| ||||| || ||| ||| | |||| || | ||| || || | ||| Sbjct 3473185 GTGGATGTTTTCA--ATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGG 3473128 Query 127880 ACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 127939 ||||| | || || | || ||| || | || || || ||||| | || ||| Sbjct 3473127 ACCTCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGAAA 3473068 Query 127940 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGTCG 127999 || || || |||| || ||||| | || ||| | |||| | | ||||| || Sbjct 3473067 AAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAGCG 3473008 Query 128000 AGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAG 128059 ||||| | || ||||| ||||||||||| ||||| | || || ||||| || Sbjct 3473007 AGATCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGTAC 3472948 Query 128060 AGTTCCCAGAGGTGGGGATACTTCAGGGGGAACA 128093 | ||||||| || || |||| | ||||||| Sbjct 3472947 ATCTCCCAGATTTGAGGGTACTGAATTGGGAACA 3472914 Score = 102 bits (112), Expect = 1e-16 Identities = 180/261 (69%), Gaps = 5/261 (2%) Strand=Plus/Minus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 |||||||| || ||||| || ||||||||||| |||||| || ||| ||||| | ||| Sbjct 274994 TGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAGGCATCAAGCCC 274935 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 | || ||||||||||| || || || || || ||||| || || || || ||||| Sbjct 274934 CTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAGAAAAATATGCCTTCGACACAA 274875 Query 127652 GCGAACGCAAATAGACGCTC-GGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 127710 || || || | ||| | ||| || |||| | | || | ||| | | | | || Sbjct 274874 GCAAAGGCGAGTAGCCTCTCTGGAAAAGACTCAGAACCCTCGATCCAGCGA----AGGGC 274819 Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 127770 ||| | ||||| || |||| ||| || ||||| | ||||| ||||| | |||| Sbjct 274818 CCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAGAGCTTGCTCTT 274759 Query 127771 TTCTGATGGATCTTTGATGTA 127791 ||| | ||| |||||||| Sbjct 274758 CTCTTCAGAATCCTTGATGTA 274738 Score = 96.9 bits (106), Expect = 4e-15 Identities = 192/280 (69%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 12791 GAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATT--CGCG 12848 ||| |||||||| ||||| || || |||||||| || || || ||||||||||| | | Sbjct 2159309 GAATCCATCCATTTCAGTTAATAGCTGATTGATAGTCTGCTCTCGTTCATCATTTCCACC 2159368 Query 12849 GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATA 12908 || | || || | |||||| | || || || |||||||| ||||| || || || Sbjct 2159369 ACCAAGC--CCAGCTCCTCGTTGCCTTCCCACAGCATCAATTTCATCAATAAAGACAATG 2159426 Query 12909 CACGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 12967 || || | || || ||| ||||| | ||| | ||||| ||| || ||||| Sbjct 2159427 CAAGG-GGCCTTGGACTTGGCTTTCTCAAACAAATCCCTTACTCTTGAGGCTCCAACACC 2159485 Query 12968 CACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACC 13027 |||||||| ||||||||| | | || | || || || || || | ||| || Sbjct 2159486 CACAAACAGCTCCACAAATTCTGAAGCTGCGCAGGAGAAAAATGGAACACCTGCTTCTCC 2159545 Query 13028 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 13067 || | || | ||| || |||||||| ||||| |||||| Sbjct 2159546 GGCCACTGCCCTGGCCAGAAGGGTCTTTCCCGTTCCTGGT 2159585 >seq412 Length=943016 Score = 91.5 bits (100), Expect = 2e-13 Identities = 243/366 (66%), Gaps = 4/366 (1%) Strand=Plus/Minus Query 12704 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 12763 |||||| | || || | ||||| || || |||||||| || || || || || Sbjct 350336 ATCAAACCTTCCAGGCCTCAGGAGTGCAGAATCCAGGATATCTGCACGATTGGTTGCAGC 350277 Query 12764 GATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 12823 ||||| | |||||| || | |||||||||||||||||||| | |||||| || | Sbjct 350276 AATGACGATGATGCCGGTGTTCCCTTCGAAGCCATCCATCTCAGTTAGGAGTTGGTTCAG 350217 Query 12824 GGTTTGTTCACGTTCATCATTCGCGGGCATACCACCCGCACTGCGTTGCTTACCGACGGC 12883 || ||||| | |||||| ||| | | ||| | | | ||| ||| || || Sbjct 350216 AGTCTGTTCCCTTTCATCGTTCCCCCCTCCAATACCAGTTCCCCTTTGACGACCCACAGC 350157 Query 12884 GTCAATTTCGTCAATGAAAACGATACA-CGGTTGATTTTCACGGGCAACTTCAAAGATAT 12942 ||||||||||| | || ||||| || || | ||| | | | ||| ||| | || Sbjct 350156 ATCAATTTCGTCCACAAAGACGATGCAGGGGGCGTTTTCCTTTGCCTTCTTGAAA-AGAT 350098 Query 12943 CTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATT 13002 | || ||||| ||||| || ||||||||||| || ||||| | || | | | ||| Sbjct 350097 CACGGACTCTGGAAGCACCAACTCCCACAAACATTTCGACAAACTCGGAACCAG-AGATT 350039 Query 13003 G-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTC 13061 | || ||| || || | ||| || || ||||| || | | |||||| || || Sbjct 350038 GAGAAGAATGGCACCCCAGCTTCGCCAGCAATGGCCTTAGCCAACAAGGTCTTTCCAGTG 349979 Query 13062 CCTGGT 13067 |||||| Sbjct 349978 CCTGGT 349973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503227540880