Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq317 116 4e-21 seq304 116 4e-21 seq415 109 6e-19 seq255 98.7 1e-15 seq3 95.1 1e-14 >seq1 Length=8502017 Score = 118 bits (130), Expect = 1e-21 Identities = 149/201 (74%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| ||||| || | || |||||| |||| ||||||||||| ||| Sbjct 7226582 GTGCTCTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGCCCGTCCTCGAGCTGCTTCCCG 7226523 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| ||||| | |||||| || | || | || |||||| ||| ||| ||| ||| Sbjct 7226522 GCGAAGATCAATCTCTGCTGATCTGGGGGGATGCCCTCCTTATCCTGGATTTTCGCCTTC 7226463 Query 46517 AGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | ||| | | | ||||| |||| || || || | ||||||||||| || || || Sbjct 7226462 A-CGTTGTCGATGGTGTCTGAGCTC---TCGACCTCTAGAGTGATGGTTTTCCCGGTGAG 7226407 Query 46573 CGTTTTAACAAAGATTTGCAT 46593 || || |||||||| ||||| Sbjct 7226406 GGTCTTCACAAAGATCTGCAT 7226386 Score = 109 bits (120), Expect = 6e-19 Identities = 145/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| |||||||| | || ||||| |||| ||||||||||| ||| Sbjct 7226354 GTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 7226295 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 || || || | ||||||||||| | || | || ||| ||||| ||||||| ||| Sbjct 7226294 GCAAAGATGAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTCGCTTTG 7226235 Query 46517 AGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 | | | | ||||| ||| ||| || || | |||||||| || ||||| || Sbjct 7226234 ACGTTATCGATAGTGTCCGAGCT---TTCAACCTCAAGGGTGATGGTCTTACCCGTGAGG 7226178 Query 46574 GTTTTAACAAAGATTTGCAT 46593 || || |||||||| ||||| Sbjct 7226177 GTCTTCACAAAGATCTGCAT 7226158 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || || ||||| ||||| |||||||| | || ||||| |||| ||||||||||| ||| Sbjct 7226126 GTGCTTTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCG 7226067 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 || || |||| | ||||||||| | || | | ||||| || ||||| |||| Sbjct 7226066 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGAATCTTAGCCTTG 7226007 Query 46517 AGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 | | | | ||||| ||| ||| || || | || || || ||||||||||| Sbjct 7226006 ACATTATCAATGGTGTCTGAGCT---TTCAACCTCGAGGGTAATTGTCTTGCCCGTCAGG 7225950 Query 46574 GTTTTAACAAAGATTTGCATT 46594 ||||| |||||||| |||||| Sbjct 7225949 GTTTTCACAAAGATCTGCATT 7225929 >seq317 Length=1979591 Score = 116 bits (128), Expect = 4e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||||| || ||||| || || |||||||||| || |||||| | || || Sbjct 618305 ACCAGATGCAGCGTTGATTCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGCCCATCCTCA 618246 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| |||||||||||||| || ||||| || | || | | ||||||||| Sbjct 618245 AGCTGCTTCCCGGCGAATATCAACCGTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGA 618186 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | ||| | | | |||||| || || || || | ||| || || || Sbjct 618185 ATCTTCGCCTTCA-CGTTGTCGATAGTGTCGGAGGACTCTACCTCTAGCGTAATCGTCTT 618127 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 ||||| || ||||| || ||||| ||||| || Sbjct 618126 CCCCGTAAGGGTTTTCACGAAGATCTGCATCTT 618094 >seq304 Length=3547449 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| ||| ||||| ||||| || ||||||| |||||||| | || ||| Sbjct 3199057 ACCAGGTGCAGTGTGGATTCCTTCTGGATGTTATAGTCGGCGAGAGTGCGTCCATCTTCG 3199116 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| |||||||| ||||| |||||||| || | || | | ||||| ||| Sbjct 3199117 AGCTGCTTTCCGGCGAAGATCAACCGCTGCTGATCCGGAGGAATCCCTTCCTTATCCTGA 3199176 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | |||||| |||||||| |||| || || || || Sbjct 3199177 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGATTCCACCTCCAGAGTAATCGTCTTC 3199236 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 ||||| || ||||| || ||||| ||||| || Sbjct 3199237 CCCGTAAGGGTTTTCACGAAGATCTGCATCTT 3199268 >seq415 Length=3446356 Score = 109 bits (120), Expect = 6e-19 Identities = 145/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||||||||| |||||||| | | |||||| |||| || |||||||||||| Sbjct 2240334 GTGCTCTCCTTTTGGATGTTGTAGTCCGCCAAGGTGCGCCCGTCCTCAAGCTGCTTGCCG 2240393 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 || || ||||| | |||||| || | || | | |||||| ||| |||||| ||| Sbjct 2240394 GCAAAGATCAACCTCTGCTGATCCGGGGGGATTCCCTCCTTATCCTGAATCTTCGCCTTC 2240453 Query 46517 AGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 | | | | ||| || ||| ||| || || | ||||||||||| || || || Sbjct 2240454 ACATTGTCGATCGTATCCGAGCT---TTCGACCTCAAGGGTGATGGTTTTCCCTGTGAGA 2240510 Query 46574 GTTTTAACAAAGATTTGCAT 46593 || || |||||||| ||||| Sbjct 2240511 GTCTTGACAAAGATCTGCAT 2240530 >seq255 Length=3424836 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| || | || |||||||| |||||||||||||| | || |||||| | || || Sbjct 2252987 CACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAGTCAGCGAGGGTGCGCCCATCCTC 2253046 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| ||||| || || | | |||||| || | || | | |||||||||| Sbjct 2253047 CAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTG 2253106 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||| || | ||| | | | | | |||||| ||| || |||| |||||||||| Sbjct 2253107 GAT-TTTTGCTTTCACATTGTCGATGGTGTCGGAGCTTTCGACCTCCAAAGTGATGGTTT 2253165 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || ||||| || ||||| Sbjct 2253166 TCCCGGTGAGGGTCTTCACAAAAATCTGCAT 2253196 >seq3 Length=5347415 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| || || |||| || ||||| | || || ||||||||||| ||||| Sbjct 3172627 CTCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 3172686 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | ||||| ||| |||||| ||||| ||| Sbjct 3172687 GATGAGTCTCTGCTGGTCTGGGGGGATTCCTTCCTTATCCTGGATCTTGGCCTTGA-CGT 3172745 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| |||| ||||| || | || ||||| ||||| || || || | Sbjct 3172746 TGTCGATGGTGTCAGAGCTC---TCCACTTCAAGAGTTATGGTCTTGCCAGTTAGAGTCT 3172802 Query 46578 TAACAAAGATTTGCAT 46593 | |||||||| ||||| Sbjct 3172803 TGACAAAGATCTGCAT 3172818 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || || || ||||| |||||||||| || || || | || ||| Sbjct 3172838 ACCAAGTGCAAGGTCGATTCTTTCTGGATGTTGTAGTCGGCAAGGGTACGACCATCCTCG 3172897 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||||||||| || |||| | ||||| || | || | | ||||||||| | Sbjct 3172898 AGTTGCTTGCCGGCAAAAATCAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGG 3172957 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||| | | | | | | |||||| |||||| || | ||||| ||||| Sbjct 3172958 ATCTT-GGCTTTAACATTGTCAATGGTGTCGGAACTTTCCACCTCGAGGGTGATTGTTTT 3173016 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || ||||| || ||||| ||||| Sbjct 3173017 TCCTGTGAGGGTTTTCACGAAGATCTGCAT 3173046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234740081360