Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12]
518 sequences; 100,688,548 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq304 95.1 8e-15
seq3 95.1 8e-15
seq255 93.3 3e-14
seq482 86.0 4e-12
>seq304
Length=3547449
Score = 95.1 bits (104), Expect = 8e-15
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 39491 CGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGG 39550
|||| || || | || || |||| |||| ||| ||| || || || ||||| ||||
Sbjct 3199037 CGCCACCGCGTAGGCGGAGGACCAGGTGCAGTGTGGATTCCTTCTGGATGTTATAGTCGG 3199096
Query 39551 CCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610
| | | |||| |||| || | || || ||| | || || || ||||||||||||| |
Sbjct 3199097 CGAGAGTGCGTCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCGCTGCTGATCCGGAG 3199156
Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTT 39667
| | ||||| || || | | | || | || | || |||| | ||||| | | ||
Sbjct 3199157 GAATCCCTTCCTTATC-CTGAATCTTGGCCTTCACATTGTCG--ATGGTGTCGGAGGATT 3199213
Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| |||| |||||| || || ||||| | ||||| ||||||||||||||
Sbjct 3199214 CCACCTCCAGAGTAATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 3199265
>seq3
Length=5347415
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || |||| ||| || || | || | ||| || || || || || ||||| ||
Sbjct 3172135 GCCCCCACGCAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGC 3172194
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
|||| | |||| |||| || |||||| | || || | | |||||| |||| |||
Sbjct 3172195 CAAAGTCCTGCCATCTTCCAGCTGCTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGG 3172254
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCA 39670
| || |||||||| || ||| || | ||| | ||| ||||| | ||| ||||
Sbjct 3172255 GATCCCCTCTTTGTCCTGAATCTTTGCCTTCA-CGTTGTCTATGGTGTCCGAGCTCTCCA 3172313
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| ||||| || |||||||| || || | ||| || ||||||||||||||
Sbjct 3172314 CCTCCAAGGTGATTGTTTTCCCAGTGAGAGTCTTCACGAAGATCTGCAT 3172362
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|| || ||||| ||||| || |||||| || || || || ||||| | || ||
Sbjct 3172832 CGGAGGACCAAGTGCAAGGTCGATTCTTTCTGGATGTTGTAGTCGGCAAGGGTACGACCA 3172891
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| || | ||| || ||| ||||||| | | |||||||||| ||| | ||||| |||
Sbjct 3172892 TCCTCGAGTTGCTTGCCGGCAAAAATCAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTG 3172951
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| || || ||||| | | | ||||| | |||||||| || | || |||
Sbjct 3172952 TCCTGGATCTTGGCTTTAACATTGTCAATGGTGTCGGAACTTTCCACCTCGAGGGTGATT 3173011
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| || || | ||||| ||||||||||||||
Sbjct 3173012 GTTTTTCCTGTGAGGGTTTTCACGAAGATCTGCAT 3173046
>seq255
Length=3424836
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567
|| ||||| || | ||||| || || || ||||| || || || | ||| ||||
Sbjct 2252985 AGCACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAGTCAGCGAGGGTGCGCCCATCC 2253044
Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627
|||| || |||||| |||| || | | ||||||||||| ||| | || || |||||
Sbjct 2253045 TCCAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGGGGGATTCCCTCCTTGTCC 2253104
Query 39628 CATATTTTTTGTTT--AATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTG 39685
|||||| ||| || |||| | ||||| | |||||| || |||||||| || |
Sbjct 2253105 TGGATTTTTGCTTTCACATTGTCG--ATGGTGTCGGAGCTTTCGACCTCCAAAGTGATGG 2253162
Query 39686 TTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| || || | || || || || ||||||||
Sbjct 2253163 TTTTCCCGGTGAGGGTCTTCACAAAAATCTGCAT 2253196
>seq482
Length=739299
Score = 86.0 bits (94), Expect = 4e-12
Identities = 161/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 39491 CGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGG 39550
|||| || || | || || |||| ||||| || ||| || || ||||| ||||| |
Sbjct 127924 CGCCACCCCGAAGGCGGAGGACCAGATGCAGTGTAGATTCCTTCTGAATATTGTAATCAG 127983
Query 39551 CCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610
| | | ||| |||| || | || |||||| | || ||||| ||||||||||||| |
Sbjct 127984 CAAGAGTACGTCCATCTTCAAGCTGCTTCCCGGCGAAGATTAACCGCTGCTGATCCGGAG 128043
Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTT 39667
| | ||||| ||||| | | | || | || | || || | | ||||| | | |
Sbjct 128044 GGATCCCTTCCTTGTC-CTGAATCTTGGCCTTGACATTGT--CAATGGTGTCCGAGGACT 128100
Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| |||| ||||| || |||||||| | || || || |||||||||||
Sbjct 128101 CCACCTCCAGCGTAATCGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCAT 128152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347367407012294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |