Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq414 116 4e-21 seq412 89.7 6e-13 >seq414 Length=5667865 Score = 116 bits (128), Expect = 4e-21 Identities = 196/281 (70%), Gaps = 12/281 (4%) Strand=Plus/Plus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTG 9339 || |||||||| || || || || || || ||||| || || ||||||||||| | | Sbjct 2159310 AATCCATCCATTTCAGTTAATAGCTGATTGATAGTCTGCTCTCGTTCATCATTTCCACCA 2159369 Query 9340 GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATAC 9399 || | ||||| | |||||| ||||||| |||||||| |||||||| |||||||| | Sbjct 2159370 CCAAGC--CCAGCTCCTCGTTGCCTTCCCACAGCATCAATTTCATCAATAAAGACAATGC 2159427 Query 9400 ATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACA 9455 | || ||| || ||| | ||||| | ||| | || ||| ||| || ||| Sbjct 2159428 AAGGGGCCTTGGACTT----GGCTTTCTCAAACAAATCCCTTACTCTTGAGGCTCCAACA 2159483 Query 9456 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 9515 || ||||||| ||||||||| | || || | || || || || ||| | ||| Sbjct 2159484 CCCACAAACAGCTCCACAAATTCTGAAGCTGCGCAGGAGAAAAATGGAACACCTGCTTCT 2159543 Query 9516 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 || || | || | ||| ||||| ||||| ||||| ||||| Sbjct 2159544 CCGGCCACTGCCCTGGCCAGAAGGGTCTTTCCCGTTCCTGG 2159584 Score = 107 bits (118), Expect = 2e-18 Identities = 393/606 (65%), Gaps = 17/606 (3%) Strand=Plus/Minus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 |||||||| ||||| || ||||| |||||||| |||||| | || ||||| | ||| Sbjct 274994 TGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAGGCATCAAGCCC 274935 Query 117346 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 117405 | || |||||||| | ||||||||||| |||||||| || || || || ||||| Sbjct 274934 CTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAGAAAAATATGCCTTCGACACAA 274875 Query 117406 GCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCC 117465 ||||| || | || | ||| | || || ||| || | ||| | ||| Sbjct 274874 GCAAAGGCGAGTAGCCTCTCTGGAAAAGACTCAGA---ACCCTCGATCCAGCGAAGGGCC 274818 Query 117466 CATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACT---GCTTC 117522 || ||||||||||| || | ||| || || |||| || || || | || |||| Sbjct 274817 CAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAGAGCTTGCTCTTC 274758 Query 117523 TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGA--ATATGTTTCGCCATGAA 117580 | |||||| |||||| |||||| | || | || | || ||| | || |||| Sbjct 274757 TCTTCAGA---ATCCTTGATGTATGTTTCCA--AAAGTAGACTATACATCTCTGAGTGAA 274703 Query 117581 CCATTTCATTATGGCAT-TGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCA 117639 ||||| | || || || | | || || | | || || | ||| || || Sbjct 274702 TATTTTCAAT-TGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACCTGGACCTCC 274644 Query 117640 TCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCC 117699 | | || || | | |||||| | ||| ||||||||||| | || ||||| || Sbjct 274643 TTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCGAAGAAGGCT 274584 Query 117700 AGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGGGTCTTCCAGTCGTCAAGATCT 117759 || | | || ||||| | ||| || | | |||| ||||||| |||||| Sbjct 274583 AGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGTGACGGAGATCT 274524 Query 117760 TTGGACAAATCAACTTCTTCCGCAGTCCAATTGCTCATTTGAGCCTTTTTATAGAGTTCC 117819 | || ||||||||||||||||| |||||| | | ||||| || || | ||| Sbjct 274523 TGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTGTACATCTCC 274464 Query 117820 CAGAGTTGTGGATACTTCAGGGGGAAGACTGTAAATCTGTTTAGGG-TGGGGGCCAGAAT 117878 |||| || || |||| | ||||| | || | | | | |||| ||||||| |||| Sbjct 274463 CAGATTTCAGGGTACTGAATTGGGAACA-TGCAGAAGCGATCAGGGTTGGGGGCAAGAAG 274405 Query 117879 AGGTTC 117884 ||||| Sbjct 274404 CGGTTC 274399 Score = 105 bits (116), Expect = 8e-18 Identities = 338/519 (65%), Gaps = 13/519 (3%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||||||| |||| ||||| || |||||||| | | ||| ||| |||||| Sbjct 3473772 TACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGTTCCATC 3473713 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAATGGG-TGGCACCCCAACTTGTTTGAGGAGACG 117104 |||| || || |||| || || | | | | ||||||| | | | | Sbjct 3473712 CAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGTACCCCAA-TGCAACCAACAATCT 3473654 Query 117105 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACA 117164 ||||| ||| |||| ||||| | | ||||| ||| || ||||| || | || | || Sbjct 3473653 ATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGCCTGCA 3473594 Query 117165 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 117224 || | || || | | ||| | | ||||| || || || || ||||| |||| Sbjct 3473593 CGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGAGCCCGTG 3473534 Query 117225 GATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTC 117281 | ||||| | | | | ||| ||| | | | ||||| || || || Sbjct 3473533 CACCGTTTCTTCACTAAGCTTCACTTTAAGCAGACTAT---AGAGCAAGCAAGCGAAGTC 3473477 Query 117282 CTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAG 117341 || | ||||||||| |||||||| || ||||| |||||| | || ||||| || Sbjct 3473476 ACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGCATCAG 3473417 Query 117342 ACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 117401 ||||| ||| |||||||| | || || ||||| || ||||| || ||||| ||||| Sbjct 3473416 ACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAATATACCTTCCAC 3473357 Query 117402 ACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGA-CTTTGTGTCAAACCATTTCA 117460 || ||||| || | || | ||| ||||| || ||| | | || ||| | | Sbjct 3473356 GCAGGCAAAAGCCAGTAGCCTCTCTGCGAACGACTCAGAACCATCGATCCAACGA----A 3473301 Query 117461 TTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTT 117499 ||||| ||||||||||||| | ||| || || |||| Sbjct 3473300 GGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTT 3473262 >seq412 Length=943016 Score = 89.7 bits (98), Expect = 6e-13 Identities = 244/366 (67%), Gaps = 6/366 (2%) Strand=Plus/Minus Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253 |||||| | || || | ||||| || ||| |||||||| | ||||| || || || Sbjct 350336 ATCAAACCTTCCAGGCCTCAGGAGTGCAGAATCCAGGATATCTGCACGATTGGTTGCAGC 350277 Query 9254 GATGACAACAATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9312 ||||| | || || || ||| | || || ||||||||||| || | |||||||| | Sbjct 350276 AATGACGATGATGCCGGTGTTCCCT-TCGAAGCCATCCATCTCAGTTAGGAGTTGGTTCA 350218 Query 9313 TAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGG 9372 ||| ||||||| |||||| ||| | | ||||| | | ||| ||||| | Sbjct 350217 GAGTCTGTTCCCTTTCATCGTTCCCCCCTCCAATACCAGTTCCCCTTTGACGACCCACAG 350158 Query 9373 CATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGAT 9432 ||||||| || || | ||||| || || || ||||| || | | || |||| Sbjct 350157 CATCAATTTCGTCCACAAAGACGATGCAGGGGGCGTTTTCCTTTGCCTTCTTGAAAAGAT 350098 Query 9433 CGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATT 9492 | || || || || || || || |||||||| || ||||| | | | | | ||| Sbjct 350097 CACGGACTCTGGAAGCACCAACTCCCACAAACATTTCGACAAACTCGGAACCAG-AGATT 350039 Query 9493 G-GATGAAGGGGACATTAGATTCACCCGCAATGG-CTCGGGCGAGAAGAGTCTTACCCGT 9550 | || ||| || || || ||| || ||||||| || | | | ||| ||||| || || Sbjct 350038 GAGAAGAATGGCACCCCAGCTTCGCCAGCAATGGCCTTAGCCAACAAG-GTCTTTCCAGT 349980 Query 9551 ACCTGG 9556 ||||| Sbjct 349979 GCCTGG 349974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976979874320