Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq414 237 2e-57 seq507 89.7 6e-13 >seq414 Length=5667865 Score = 237 bits (262), Expect = 2e-57 Identities = 581/872 (67%), Gaps = 9/872 (1%) Strand=Plus/Minus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| ||||| |||||| | ||||||||||| || || |||| || ||| Sbjct 275300 TTTTGGTATTCACCAACTCGCCTCTCAAAGAAATTGGTCTTCCCCTGCAAACTTATGAGC 275241 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 ||||| ||||||| ||||| | | || || | || || | || || | || Sbjct 275240 TCCATCCAATCAAAAGGATTATGTGAGTTGTACAACTTCTTATACCCCAAGGTGACCAGC 275181 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 | | ||||||| ||||| | || ||| | |||||| || | |||||||| | | Sbjct 275180 AATTTATCCGCCACAAACTCTATGTATTGGCTCATCAACTCTGAGTTCATTCCCAGAAGC 275121 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909 | ||||| ||||| || ||| ||| ||| ||||| ||||| || | | || Sbjct 275120 CTGCAAGGTAACGCATCACAAACAAACTCTCTTTCAATATTCACTGCATCCGCCACAAGC 275061 Query 18910 G-ATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 || || || | |||||| || | | |||| | || | || || || || || Sbjct 275060 CCATGCACCTTT-TCTTCACTAAGTTTCCCTCGAAGCAGACTATAGATTAAGCAAGCGAA 275002 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 ||||||||| || || || || | || | |||||| || || || ||||||||||| Sbjct 275001 ATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAGGCAT 274942 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGAT-CCAGAAAAGAATATACCTT 19087 || || |||||||| ||||||||||||| ||| | | | || || || ||||| |||| Sbjct 274941 CAAGCCCCTTTTTTTCAACCAGAATATAGC-GCAGAAGCTTCCGGAGAAAAATATGCCTT 274883 Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147 | || ||||| || | ||| || ||| | || | ||| | | ||||| Sbjct 274882 CGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAA---GACTCAGAACCCTCGATCCAGC 274826 Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207 || ||||||| |||||||||| ||||| || | || || || | | || || | Sbjct 274825 GAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAGAGCT 274766 Query 19208 ACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267 | ||| || | ||| || | |||| || | | || ||| ||||| ||||| | Sbjct 274765 TGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTATACATCTCTGAGT 274706 Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327 |||||||||| || || ||||| || || ||||| || || || | | ||| || | Sbjct 274705 GAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACCTGGACCT 274646 Query 19328 CACTACAA-AATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386 | || || ||||| | ||| ||| || ||| |||||||| || || || || Sbjct 274645 C-CTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCGAAGAAG 274587 Query 19387 GCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATA 19446 |||| |||||||| || ||||| || || || || || | | ||||| | | | | Sbjct 274586 GCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGTGACGGAGA 274527 Query 19447 TCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATG 19506 |||| |||||||| |||||||| | |||||||| ||||||||||| || || ||||| Sbjct 274526 TCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTGTACATC 274467 Query 19507 TTCCATATATCACGATATTGTATAGGAAATAT 19538 | ||| || ||| | || || || || || || Sbjct 274466 TCCCAGATTTCAGGGTACTGAATTGGGAACAT 274435 Score = 125 bits (138), Expect = 8e-24 Identities = 383/586 (65%), Gaps = 11/586 (2%) Strand=Plus/Minus Query 18957 CAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGT 19016 ||| || || || |||||||||| ||||| || | || | ||||| || || || Sbjct 3473491 CAAGCAAGCGAAGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGT 3473432 Query 19017 TAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAA 19076 || || |||||||| || || ||||| ||||||||||| | | || ||| || || Sbjct 3473431 CAACCCGGGCATCAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAA 3473372 Query 19077 GAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATT 19136 ||||||||||| || |||||||| | ||| || ||| | ||| | ||| | Sbjct 3473371 AAATATACCTTCCACGCAGGCAAAAGCCAGTAGCCTCTCTGC-GAAC--GACTCAGAACC 3473315 Query 19137 ATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGA 19196 || ||||| || |||||| |||||||| | ||||| || | || || |||| Sbjct 3473314 ATCGATCCAACGAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGC 3473255 Query 19197 ATTAAATAGATACATACGC---TCATCTGTATCTTTAACATATGCATCTATCAATAAACT 19253 | || || | | | | || || | ||| || | || | || | | | ||| Sbjct 3473254 ACGGAAGAG---CCTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACT 3473198 Query 19254 GTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTC 19313 ||||| || || || || ||||| || || ||||| || |||||||| | || || Sbjct 3473197 ATACATCTCAGAGTGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTC 3473138 Query 19314 TGTTATCTGTACTTCACTACA-AAATCTTTCGACCAAATTTTCATTAACTATTCCATCAC 19372 | | ||| || || || || || || | | | |||||| || || || || Sbjct 3473137 CGAAACCTGGACCTC-CTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGG 3473079 Query 19373 TAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTAT 19432 || || ||||| |||| | |||||| || ||||| ||||| || || || | | | Sbjct 3473078 AGGCGGCGAAAAAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGT 3473019 Query 19433 TCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTG 19492 ||| | | | ||||| ||| | ||| || || || | ||||| || || || |||| Sbjct 3473018 ACCAGTGAGCGAGATCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTG 3472959 Query 19493 CTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATAT 19538 |||| || ||||| | ||| || | | | || || || || || || Sbjct 3472958 CTTTCTTGTACATCTCCCAGATTTGAGGGTACTGAATTGGGAACAT 3472913 >seq507 Length=3453940 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418 |||||||||||| | ||| | |||||| | || ||||||| | ||| || | ||| || Sbjct 789398 ACCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCC 789457 Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGA 48478 ||| ||| | ||||| || || ||||| ||||| | || | || || || || Sbjct 789458 ATTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGA 789517 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | ||| || ||||| || ||| || | |||||| || |||||||||||||| Sbjct 789518 GAGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAAT 789577 Query 48539 TCCTTCTATACTATCATCTATCAT 48562 || || |||||||| || |||| Sbjct 789578 GCCCTCAATACTATCTTCCTTCAT 789601 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418 |||||||||||| | ||| | |||||| | || ||||||| | ||| || | ||| || Sbjct 792217 ACCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCC 792158 Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGA 48478 ||| ||| | ||||| || || ||||| ||||| | || | || || || || Sbjct 792157 ATTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGA 792098 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | ||| || ||||| || ||| || | |||||| || |||||||||||||| Sbjct 792097 GAGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAAT 792038 Query 48539 TCCTTCTATACTATCATCTATCAT 48562 || || |||||||| || |||| Sbjct 792037 GCCCTCAATACTATCTTCCTTCAT 792014 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 ||||| | ||| || | ||| ||||| ||||| ||||||||| || || |||| | Sbjct 789709 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 789768 Query 48660 TATGTTTCAATAACAGAATCTATATCC-CATTGATGTATACCTATAGATACACGCATTAA 48718 ||||| | || | | || || ||||| | ||| || || || | | || | ||| | Sbjct 789769 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 789827 Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778 ||||| ||||||||||||||||| | || || || |||| || || ||||||| Sbjct 789828 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 789887 Query 48779 TGTTTTAAAACCAAAATAGT 48798 || || |||||||| |||| Sbjct 789888 AGTCTTGAAACCAAAGTAGT 789907 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 ||||| | ||| || | ||| ||||| ||||| ||||||||| || || |||| | Sbjct 791906 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 791847 Query 48660 TATGTTTCAATAACAGAATCTATATCC-CATTGATGTATACCTATAGATACACGCATTAA 48718 ||||| | || | | || || ||||| | ||| || || || | | || | ||| | Sbjct 791846 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 791788 Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778 ||||| ||||||||||||||||| | || || || |||| || || ||||||| Sbjct 791787 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 791728 Query 48779 TGTTTTAAAACCAAAATAGT 48798 || || |||||||| |||| Sbjct 791727 AGTCTTGAAACCAAAGTAGT 791708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562105160345520