Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq98 136 3e-26 seq452 116 3e-20 seq410 111 1e-18 seq1 111 1e-18 seq482 100 2e-15 seq255 93.3 3e-13 seq415 91.5 1e-12 >seq98 Length=3145730 Score = 136 bits (150), Expect = 3e-26 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 550309 TAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGC 550368 ||| |||||||| | || ||||||| || |||||||| ||||||||||| | | || Sbjct 2901848 TAAGCAATTTTCTGCTGAGGAAATTTCGTCCATGGTTTTGATGAAAATGAAGGAGATTGC 2901789 Query 550369 CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAA 550428 || | ||||| | || | | | ||||| | || || || || ||||| || Sbjct 2901788 AGAGGCATACCTTGGTTCAACTGTGAAGAACGCAGTGGTTACCGTTCCTGCGTATTTCAA 2901729 Query 550429 TGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCG 550488 |||||| || |||||||| || || ||||| || ||| |||| ||||||||| | || Sbjct 2901728 TGACTCGCAGCGTCAAGCCACCAAGGATGCAGGTGTCATTTCTGGTCTTAATGTTATGCG 2901669 Query 550489 TATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||||| ||||| ||||| ||||||||| |||| |||||| | || || Sbjct 2901668 TATTATTAATGAGCCTACCGCTGCTGCAATTGCTTATGGATTGGACAA 2901621 Score = 125 bits (138), Expect = 6e-23 Identities = 435/671 (65%), Gaps = 6/671 (1%) Strand=Plus/Minus Query 551917 CTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATT 551976 |||| || || || ||| || | || || || |||| || || ||||| | |||| Sbjct 2901378 CTTGTGAGAGGGCAAAAAGAACGCTCTCTTCCACAGCTCAGACAACCATTGAGATTGATT 2901319 Query 551977 CATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTT 552036 | | | |||||| ||||| | | ||| | ||| | | || | |||||| || | Sbjct 2901318 CCCTGTATGAGGGTATTGACTTCTACACGACCATTACTCGTGCTAGATTTGAGGAGCTCA 2901259 Query 552037 GTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTTAAGAGATTCAAAG 552095 || | |||||||| || |||||||| ||| |||| |||||| ||| | || Sbjct 2901258 ACATGGACTTGTTTAGAAAGTGCATGGAACCAGTTGAA-AAGTGTTTAAGGGATGCCAAA 2901200 Query 552096 ATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAA 552155 || || ||| || || || || |||| || ||||||||||| || || || || || Sbjct 2901199 ATGGACAAAAGCACGGTGCACGATGTTGTTCTAGTTGGTGGATCCACTAGGATCCCCAAG 2901140 Query 552156 ATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCC 552214 ||| || || | || ||| ||||||||| || || | | ||| | || || Sbjct 2901139 GTTCAACAATTGCTGCAGGACTT-TTTCAATGGCAAGGAACTTTGCAAGAGTATCAACCC 2901081 Query 552215 AGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGA 552274 ||||| || ||||| ||||| || || | || || || || | ||| | | | Sbjct 2901080 TGATGAAGCAGTTGCATATGGAGCTGCCGTGCAGGCTGCGATATTGAGTGGCGAGGGTAA 2901021 Query 552275 TGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAAC 552334 |||||| | || || | | ||| | ||||| ||||| || || |||||| | ||||| Sbjct 2901020 TGAAAAGGTGCAGGATCTGCTGCTTCTGGATGTCACTCCCCTTTCGCTTGGTCTTGAAAC 2900961 Query 552335 AGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATC 552394 | || ||| |||||||| || ||| ||||| || || || || || || Sbjct 2900960 CGCCGGTGGTGTTATGACTGTCCTGATCCCGAGAAACACCACCATCCCAACCAAGAAGGA 2900901 Query 552395 TCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGG 552454 | || || || || || || || ||||| ||| || || || | | ||||| Sbjct 2900900 GCAGGTGTTCTCAACCTACTCCGACAATCAGCCTGGAGTCCTTATCCAGGTCTACGAAGG 2900841 Query 552455 AGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCC 552514 ||| |||| || | || || || ||||||| ||| | | || || || Sbjct 2900840 AGAGAGAACCAGGACCAGGGACAACAACTTGCTTGGTAAATTTGAGCTCTCGGGCATCCC 2900781 Query 552515 TCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT-TACTTTCGATATCGATGCCAATGGAA 552573 |||||||| | ||||| || ||||| || | |||| ||||||||||||||||| | Sbjct 2900780 ACCTGCTCCCAGAGGAGTTCCTCAAATCACTGTGTGCTTT-GATATCGATGCCAATGGTA 2900722 Query 552574 TTTTGAATGTG 552584 | | |||||| Sbjct 2900721 TCCTCAATGTG 2900711 >seq452 Length=6822880 Score = 116 bits (128), Expect = 3e-20 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 || |||||| || | || ||||||| || ||||| || ||||| ||||| | | || Sbjct 3344956 AAGCAATTTGCAGCTGAGGAAATTTCCTCCATGGTCTTGATGAAGATGAAGGAGATTGCG 3344897 Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429 || | | ||||| || | |||| || | ||||| ||||| || || ||| Sbjct 3344896 GAGGCATATCTTGGTTCGACCGTGAAAAATGCTGTTGTGACTGTCCCAGCTTACTTCAAT 3344837 Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGT 550489 ||||| ||||||||||| || |||||||| || |||| ||||| | ||||| | ||| Sbjct 3344836 GACTCTCAACGTCAAGCCACAAAAGATGCCGGCGTTATTTCTGGAATGAATGTCATGCGT 3344777 Query 550490 ATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || |||||||| || || |||||||| | || ||||| || || || Sbjct 3344776 ATAATCAATGAGCCAACGGCTGCTGCCATAGCTTATGGCCTAGACAA 3344730 >seq410 Length=2493952 Score = 111 bits (122), Expect = 1e-18 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 550334 TCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTT 550393 ||||| |||||||| || |||||||| | | || || | ||||| | || Sbjct 2368125 TCATCCATGGTTTTGATAAAAATGAAGGAGATCGCTGAAGCGTACCTTGGTTCAACTGTG 2368066 Query 550394 ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAA 550453 | | |||| || | || || || |||||||| |||||||| || |||||||| || || Sbjct 2368065 AAGAATGCCGTGGTCACAGTCCCGGCATATTTCAATGACTCTCAGCGTCAAGCCACCAAG 2368006 Query 550454 GATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCT 550513 ||||| || || |||| || ||||| | ||||| |||||||| |||||||||||| Sbjct 2368005 GATGCAGGTGTCATCTCTGGTCTGAATGTAATGCGTATCATCAATGAGCCTACTGCTGCT 2367946 Query 550514 GCACTTGCATATGG 550527 ||| |||| ||||| Sbjct 2367945 GCAATTGCTTATGG 2367932 >seq1 Length=8502017 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| |||||||||||||| ||||| ||| || || ||||| || || | Sbjct 7225920 GAGACGGAGGACAAGATGAAGGGTGGACTCTTTCTGAATGTTATAGTCAGCGAGGGTGCG 7225861 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||| || ||||| |||||||| || |||||||||||||| || |||||||| || Sbjct 7225860 GCCGTCTTCGAGCTGTTTGCCGGCAAAGATCAGTCTTTGCTGATCTGGGGGAATTCCCTC 7225801 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAG 563434 |||||||| || || || || ||||| ||||| | | || || || | Sbjct 7225800 CTTATCTTGGATCTTAGCCTTGACGTTATCAATGGTATCGGAACTCTCCAC-CTCAAGGG 7225742 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | || || || ||||| ||||| ||||| || ||||| Sbjct 7225741 TGATGGTCTTTCCGGTAAGGGTTTTCACGAAGATCTGCAT 7225702 Score = 93.3 bits (102), Expect = 3e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 ||||||| ||||||||| | || | || || || || ||||| || |||||| || | Sbjct 7414050 CAGCATACTTTAATGACGCCCAGAGGCAGGCCACGAAGGATGCCGGTGTTATTGCAGGGC 7413991 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATA 550535 | |||||| || | || ||||||||||| || ||||||||| |||| ||||| | |||| Sbjct 7413990 TCAATGTTGTTAGAATCATCAATGAACCAACAGCTGCTGCAATTGCTTATGGCTTAGATA 7413931 Query 550536 A 550536 | Sbjct 7413930 A 7413930 >seq482 Length=739299 Score = 100 bits (110), Expect = 2e-15 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || ||||| || ||||| || ||| ||| || ||||||||||||||| ||||| | | Sbjct 127935 AGGCGGAGGACCAGATGCAGTGTAGATTCCTTCTGAATATTGTAATCAGCAAGAGTACGT 127994 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||| || || ||||| || || | | |||||||| ||||| || ||||| Sbjct 127995 CCATCTTCAAGCTGCTTCCCGGCGAAGATTAACCGCTGCTGATCCGGAGGGATCCCTTCC 128054 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || || ||||| || || || ||||| || || | | || | || || || || Sbjct 128055 TTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTGTCCGAG-GACTCCACCTCCAGCGT 128113 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || ||||| || || || || || || || ||||| Sbjct 128114 AATCGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCAT 128152 >seq255 Length=3424836 Score = 93.3 bits (102), Expect = 3e-13 Identities = 426/669 (64%), Gaps = 10/669 (1%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 |||||| | ||||||||||| || || | || || || |||| || || || ||| Sbjct 2810525 AGAACTTCCTGCGAAAGAGCAAAGCGGACGCTGTCTTCCACATCTCAGACAACGATAGAA 2810466 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGC--CTATTTCGAGGGCCAAATTTG 552027 || ||||| | || || ||||| || | | ||||| | || | ||||| ||| | Sbjct 2810465 GTCGATTCTCTGTTCGAAGGAATCGACTTT--TACGCCACGATCACCAGGGCGCGATTCG 2810408 Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087 | || | ||| |||||||| | ||| || || ||||| || || | | | | Sbjct 2810407 AGGAGCTCTGTATGGATCTCTTCATGAAATGCATGGAGCCAGTGGAGAAATGTCTCCGTG 2810348 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 || | |||||||| |||||| || | ||| | ||||| || || || || || || | Sbjct 2810347 ATGCCAAGATTGACAAATCCCGCGTCAACGAAGTGGTGCTCGTCGGAGGGTCGACGAGGA 2810288 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG 552207 |||| || ||| | |||| || |||||||| || | | || ||| | Sbjct 2810287 TTCCCAAGGTTCAGCAGCTGTTGCAGGATTTCTTCAATGGGAAGGAGCT--GTGCAAGAG 2810230 Query 552208 --TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 | ||||| |||||||| |||||||| || || || | || || || ||||| || Sbjct 2810229 CATAAATCC-GATGAGGCCGTTGCCTACGGCGCGGCGGTGCAGGCGGCGATTCTAATGGG 2810171 Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 || |||||| || | || || | | || ||||||| || || | || ||||| Sbjct 2810170 CGAAGGTGATGAGAAGGTTCAGGATTTGTTGCTCCTAGATGTAACACCGTTGTCACTTGG 2810111 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | ||||| | || || | |||||| | ||| ||||| ||||| ||||| Sbjct 2810110 GCTGGAAACCG-CGGGGGAGTGATGACTGTGTTGATCCCGAGAAACACTACGATTCCGAC 2810052 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || || | | || ||||| || || ||||| || | | ||| ||||| | Sbjct 2810051 CAAGAAGGAGCAGATCTTCTCTACTTACTCCGATAACCAGCCCGGAGTTCTTATTCAGGT 2809992 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 | |||||| ||||| || | ||| || || || || | || | | Sbjct 2809991 ATATGAAGGGGAAAGGGCGCGGACAAGAGACAACAACATGCTCGGGAAATTCGAGCTGAC 2809932 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 || || || || || || || || || ||||||||| | ||| ||||| ||||| || Sbjct 2809931 CGGAATCCCACCGGCGCCCCGGGGTGTTCCGCAAATTAACGTTGTCTTCGACATCGACGC 2809872 Query 552566 CAATGGAAT 552574 ||| || || Sbjct 2809871 CAACGGGAT 2809863 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/219 (70%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| |||||||| ||||| || || ||| ||||| || || || || | Sbjct 2253663 AGACGGAGAACAAGATGCAGGGTTGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGG 2253722 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || |||||||| || || |||||||||||||| || || || |||||||| Sbjct 2253723 CCGTCTTCCAGCTGTTTTCCTGCGAAGATAAGTCTTTGCTGGTC-GGGGGGATTCCTTCC 2253781 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435 ||||| || || || || || || || ||||| | | | || || || || Sbjct 2253782 TTATCCTGGATCTTAGCCTTGACGTTGTCGATGGTATCGGAGCTTTCCAC-CTCAAGGGT 2253840 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || ||||||||||| || || || ||||| Sbjct 2253841 GATTGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 2253879 Score = 87.8 bits (96), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 ||||||| ||||| || | || | ||||| || || ||||| || |||||| || | Sbjct 3157431 CAGCATACTTTAACGATGCCCAGAGGCAAGCGACAAAGGATGCCGGCGTTATTGCGGGGC 3157372 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATA 550535 | |||||| || | || ||||||||||| ||||| |||||| |||| ||||| || || | Sbjct 3157371 TCAATGTTGTTAGAATCATCAATGAACCAACTGCCGCTGCAATTGCTTATGGCCTGGACA 3157312 Query 550536 A 550536 | Sbjct 3157311 A 3157311 >seq415 Length=3446356 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||| |||||||| ||||| ||| ||||||||||| | || || Sbjct 2240085 AGACGGAGCACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCCAAGGTCCTC 2240144 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || || || || || ||||| || |||||||| || || || || || Sbjct 2240145 CCATCTTCCAGCTGCTTCCCTGCGAAGATAAGCCTCTGCTGATCTGGGGGGATACCCTCC 2240204 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435 || || ||||| || || || || || ||||||| | | || | | || || Sbjct 2240205 TTGTCCTGAATCTTGGCCTTCACATTGTCGATAGTATCAGAGCTCTCCACCTCCAAG-GT 2240263 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || ||||| |||||||| ||||| Sbjct 2240264 GATCGTCTTTCCGGTGAGCGTTTTCACGAAAATCTGCAT 2240302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029268605823820