Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq255 118 8e-22 seq482 109 4e-19 seq1 95.1 9e-15 seq415 91.5 1e-13 seq304 82.4 6e-11 >seq255 Length=3424836 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| | |||||| || ||||||||||| || || |||||||| |||| Sbjct 2252970 CCTCCCCTCAGCCTGAGCACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAGTCAGCG 2253029 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| |||||| |||||||| || || | ||| ||||||| ||| Sbjct 2253030 AGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGGGGG 2253089 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| || ||| ||| ||| | | | || || || ||| Sbjct 2253090 ATTCCCTCCTTGTCCTGGATTTTTGCTTTCACATTGTCGATGGTGTCGGAGCTTTCGACC 2253149 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| || || ||||| || || | || || ||||||||||||||| Sbjct 2253150 TCCAAAGTGATGGTTTTCCCGGTGAGGGTCTTCACAAAAATCTGCATC 2253197 >seq482 Length=739299 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| |||| || || | |||| ||| || || || || |||||||||||||||| Sbjct 127924 CGCCACCCCGAAGGCGGAGGACCAGATGCAGTGTAGATTCCTTCTGAATATTGTAATCAG 127983 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 ||| | || | || || | |||||| ||||| || || | ||||| ||||||| | Sbjct 127984 CAAGAGTACGTCCATCTTCAAGCTGCTTCCCGGCGAAGATTAACCGCTGCTGATCCGGAG 128043 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | || |||||||| |||||| || ||| | | | || || | ||||| Sbjct 128044 GGATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCCA 128103 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||||| ||||||||| || ||||| | || || ||||| ||||||||| Sbjct 128104 CCTCCAGCGTAATCGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCATC 128153 >seq1 Length=8502017 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 ||||||| | || || | ||| | ||| ||||| || |||||||| ||||| || | Sbjct 712080 CGCCGCCTCGGAGACGGAGCACAAGATGGAGCGTAGATTCCTTTTGAATGTTGTAGTCGG 712139 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || | || | || || | |||||| ||||| || |||| ||||| ||||| | | Sbjct 712140 CGAGCGTCCGTCCATCCTCAAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGATCGGGAG 712199 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | || |||||||| |||||| || || | | | || || | ||||| Sbjct 712200 GGATCCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAAGACTCCA 712259 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||||| ||||||||| || ||||| | ||||| || || ||||||||| Sbjct 712260 CCTCCAGCGTAATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 712309 >seq415 Length=3446356 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| |||||| ||||| |||||||||| | | | | || |||| |||| Sbjct 2240100 TGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCCAAGGTCCTCCCATCTTCCAGCTGC 2240159 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || || || | ||| ||||| | ||| | ||||||||||| |||||| Sbjct 2240160 TTCCCTGCGAAGATAAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGAATCTTG 2240219 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | || || || ||||||||||| || ||||| ||||| || Sbjct 2240220 GCCTTCACATTGTCGATAGTATCAGAGCTCTCCACCTCCAAGGTGATCGTCTTTCCGGTG 2240279 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | ||||| || ||||||||||| Sbjct 2240280 AGCGTTTTCACGAAAATCTGCAT 2240302 >seq304 Length=3547449 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 9088 ATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAAC 9147 || || || |||| |||||| || | ||||| || || || || ||||| |||||| Sbjct 3432608 ATCAACTGGGCAACCCTGTCACCTGTTTTCACATTGAAATCCGTATCCGAATGGTTGAAC 3432549 Query 9148 AGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCACGTCGATG 9207 || | ||| || ||| || ||||| ||| ||||||||||||| |||||||| || || Sbjct 3432548 AGGATCACCCCAACGGCTCCTCTGTAGTCCGCATCGATCACACCCGCACCCACATCAATC 3432489 Query 9208 AAGTGCTT 9215 | ||||| Sbjct 3432488 GAATGCTT 3432481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935195093314