Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq414 114 2e-20 >seq414 Length=5667865 Score = 114 bits (126), Expect = 2e-20 Identities = 376/571 (66%), Gaps = 19/571 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||||||||||||||| || || ||| |||||| || || ||| | |||||| Sbjct 3472937 ATCTGGGAGATGTACAAGAAAGCAGAAGCCTCCTTCTGGACGGCGGAGGAGGTCGATCTG 3472996 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | || | | ||||||| |||| | ||||| ||||||| |||| | Sbjct 3472997 TCTCAAGATCTCGCTCACTGGTACTCTCTGACGTCTGACGAAAAGCATTTCATCAAACAT 3473056 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 | | || || || || ||||| || || || ||| ||| ||||| | || ||| Sbjct 3473057 ATTCTAGCTTTTTTCGCCGCCTCCGACGGGATCGTGCTCGAAAATCTCGCTGCCAGGTTC 3473116 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGC-CAAGTGTTTCTACGGTTTCCAGATGGCCATCGA 25715 | | ||| || ||| |||||| | | |||| ||||| |||||||| || || || Sbjct 3473117 ATGAAGGAGGTCCAGGTTTCGGAGGCTCGCGCGTTT-TACGGCTTCCAGATTGCAATTGA 3473175 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCGC 25772 ||| | ||||||||| ||||| | ||||| || || ||||| | || | Sbjct 3473176 AAACATCCACTCTGAGATGTAT---AGTCTTCTATTGGAAACTTACATCAAGGATTCTGA 3473232 Query 25773 CGAGAGAGATC-GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831 || | ||| | |||| || |||| || || | | || | || ||| ||||||| Sbjct 3473233 AGA-AAAGAGCAGGCTCTTCCGTGCTATTGAAACCGTTCCTTGTGTCGAGAAGAAGGCGA 3473291 Query 25832 GGTGGGCCATGAAGTGGATCAACAG-CCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 |||||| | |||||| | | | ||| |||| | ||| |||| | || Sbjct 3473292 CTTGGGCCCTTCGTTGGATCGATGGTTCTGAG----TCGTTCGCAGAGAGGCTACTGGCT 3473347 Query 25891 TTTG-CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG-GCCATCTTCTGGCTCA 25948 |||| |||| ||||| || || |||||| ||| | || | || || |||||| | | Sbjct 3473348 TTTGCCTGC-GTGGAAGGTATATTTTTC-TCGGGAAGCTTCTGTGCAATATTCTGGTTGA 3473405 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 | ||| ||| ||||||||| || ||| ||||| |||||||| | |||| |||| Sbjct 3473406 AAAAGAGGGGTCTGATGCCCGGGTTGACCTTCTCCAATGAGCTCATTTCCCGGGATGAGG 3473465 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 || | || | || || || ||| ||||||| Sbjct 3473466 GTTTACATTGTGACTTCGCTTGCTTGCTCTA 3473496 Score = 100 bits (110), Expect = 5e-16 Identities = 372/571 (65%), Gaps = 13/571 (2%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || |||||||||||||||||||| | || ||||| || ||||| ||||| Sbjct 274456 GAAATCTGGGAGATGTACAAGAAGGCAGAGGCTTCCTTTTGGACGGCGGAAGAAGTTGAT 274515 Query 25534 CTGGC-CAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 | | |||| | | | |||| || | || | |||||| ||||||| |||| Sbjct 274516 TTATCACAAGATCTCCGTCA-CTGGAACTCCCTTACATCTGACGAGAAGCATTTCATCAA 274574 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 | || | || ||||| || || || ||||| || || |||||||||| | || Sbjct 274575 ACATGTTCTAGCCTTCTTCGCGGCATCCGATGGAATCGTTCTCGAGAATCTGGCTGCCAG 274634 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||||| | ||| || ||| |||||||| | || || ||||||||||| || || Sbjct 274635 ATTCATGAAGGAGGTCCAGGTTTCGGAGGCCAGGGCGTTTTATGGTTTCCAGATTGCAAT 274694 Query 25713 CGAAAATGTGCACTCTGAGGTGTAT-GCCAAGCTTCTGATGACGTACATTACAGACGTCG 25771 |||||| | ||||| ||| ||||| | | | ||| || || ||||| | || | Sbjct 274695 TGAAAATATTCACTCAGAGATGTATAGTCTA-CTTTTGGAAACATACATCAAGGATTCTG 274753 Query 25772 CCGAGAGAGATC-GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 |||| ||| | ||| || |||| || || | | || | || | | ||||||| Sbjct 274754 AAGAGA-AGAGCAAGCTCTTCCGTGCGATTGAAACCGTTCCGTGTGTCGAAAAGAAGGCG 274812 Query 25831 CGGTGGGCCATGAAGTGGATCAACAG-CCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||| | |||||| | | | ||| | ||| ||| |||| | || Sbjct 274813 AATTGGGCCCTTCGCTGGATCGAGGGTTCTGAG----TCTTTTCCAGAGAGGCTACTCGC 274868 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGG-TTCGTTTGCGGCCATCTTCTGGCTCA 25948 ||||||| ||| || ||||| |||||| ||| | | ||| || || |||||| | | Sbjct 274869 CTTTGCTTGTGTCGAAGGCATATTTTTCTCCGGAAGCTTCTGC-GCTATATTCTGGTTGA 274927 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 | | | ||| ||||| || || ||| ||||| || ||||| | || || | Sbjct 274928 AAAAAAGGGGCTTGATGCCTGGTTTGACCTTCTCCAATGAACTCATTTCGCGTGATGAAG 274987 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 ||||||| | ||||| || ||| | |||| Sbjct 274988 GTCTCCATTGTGATTTCGCTTGCTTAATCTA 275018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928838785729920