Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq414 132 6e-26 seq412 96.9 4e-15 seq507 84.2 3e-11 >seq414 Length=5667865 Score = 132 bits (146), Expect = 6e-26 Identities = 223/321 (69%), Gaps = 14/321 (4%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 ||||| || |||||| |||| ||| | | ||| ||||| |||||||||||||| Sbjct 2159623 GGTGCAAAAATCCCCAAAGGCTGTCTTTTGGTCGGTCCACCAGGAACGGGAAAGACCCTT 2159564 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 || ||| | || | || || ||| || ||| ||||| || ||| | || || | Sbjct 2159563 CTGGCCAGGGCAGTGGCCGGAGAAGCAGGTGTTCCATTTTTCTCCTGCGCAGCTTCAGAA 2159504 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||||||||| ||||||| ||||| || ||| ||| || | ||| | ||||| | ||| Sbjct 2159503 TTTGTGGAGCTGTTTGTGGGTGTTGGAGCCTCAAGAGTAAGGGATTTGTTTGAGAAAGCC 2159444 Query 175456 CGCGAAAATCAA----CCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCA 175511 || ||| || || |||||||| |||||||| |||||||| ||||| | ||| Sbjct 2159443 ----AAGTCCAAGGCCCCTTGCATTGTCTTTATTGATGAAATTGATGCTGTGGGAAGGCA 2159388 Query 175512 ACGCAGCGCTGG---TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACT 175568 ||| | ||||| |||| | |||||| || |||| || || || ||||| || Sbjct 2159387 ACGAGGAGCTGGGCTTGGT---GGTGGAAATGATGAACGAGAGCAGACTATCAATCAGCT 2159331 Query 175569 ACTCACCGAGATGGATGGCTT 175589 | | || || |||||||| || Sbjct 2159330 ATTAACTGAAATGGATGGATT 2159310 Score = 107 bits (118), Expect = 2e-18 Identities = 393/606 (65%), Gaps = 17/606 (3%) Strand=Plus/Plus Query 64618 GAACCTATTCTGGCCCCCA-CCCTAAACAGATTTACAGTCTTCCCCCTGAAGTATCCACA 64676 ||||| |||| ||||||| |||| | | | | || | ||||| | |||| || | Sbjct 274399 GAACCGCTTCTTGCCCCCAACCCTGATCGCTTCTGCA-TGTTCCCAATTCAGTACCCTGA 274457 Query 64677 ACTCTGGGAACTCTATAAAAAGGCTCAAATGAGCAATTGGACTGCGGAAGAAGTTGATTT 64736 | ||||||| | || || ||||| | | |||||| ||||||||||||||||| Sbjct 274458 AATCTGGGAGATGTACAAGAAGGCAGAGGCTTCCTTTTGGACGGCGGAAGAAGTTGATTT 274517 Query 64737 GTCCAAAGATCTTGACGACTGGAAGACCCTGAATGAAAATGAAAAGAAATTCATAAAGTA 64796 || ||||||| ||||||| |||| | | || ||| | ||||| || | Sbjct 274518 ATCACAAGATCTCCGTCACTGGAACTCCCTTACATCTGACGAGAAGCATTTCATCAAACA 274577 Query 64797 CATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAATTT 64856 | || || ||||| || | ||||||||||| ||| | |||||| | | || || Sbjct 274578 TGTTCTAGCCTTCTTCGCGGCATCCGATGGAATCGTTCTCGAGAATCTGGCTGCCAGATT 274637 Query 64857 TGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCATTCTACGCATATCA-ATGCCATAATG 64915 | | || || ||| | || || | | || || | | || || || | || Sbjct 274638 CATGAAGGAGGTCCAGGTTTCGGAGGCCAGGGCGTTTTATGGTTTCCAGATTGCA-ATTG 274696 Query 64916 AAATGGTTCATGGCGAAACATAT--TCAAAATTGATTGACAAATACATTAAGGATGGATC 64973 ||| |||| || | ||| || | || | || | |||||| |||||| || Sbjct 274697 AAAATATTCACTCAGAGATGTATAGTCTACTTT--TGGAAACATACATCAAGGAT---TC 274751 Query 64974 TGAAAAGAAGC---AGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGC 65030 |||| ||||| || | || || || |||| || || ||| | || |||||||| Sbjct 274752 TGAAGAGAAGAGCAAGCTCTTCCGTGCGATTGAAACCGTTCCGTGTGTCGAAAAGAAGGC 274811 Query 65031 GAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGC 65090 ||| ||||| | ||| | || ||| || || | ||| | || | || Sbjct 274812 GAATTGGGCCCTTCGCTGGATCGAGGGT---TCTGAGTCTTTTCCAGAGAGGCTACTCGC 274868 Query 65091 GTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAA 65150 ||||| ||||| || || || || |||||||| ||||||||||| | |||||||| Sbjct 274869 CTTTGCTTGTGTCGAAGGCATATTTTTCTCCGGAAGCTTCTGCGCTATATTCTGGTTGAA 274928 Query 65151 GAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGG 65210 || |||| | ||||| || | |||||| |||||||| ||||| || ||||| || Sbjct 274929 AAAAAGGGGCTTGATGCCTGGTTTGACCTTCTCCAATGAACTCATTTCGCGTGATGAAGG 274988 Query 65211 TCTCCA 65216 |||||| Sbjct 274989 TCTCCA 274994 Score = 105 bits (116), Expect = 8e-18 Identities = 338/519 (65%), Gaps = 13/519 (3%) Strand=Plus/Plus Query 65003 AAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAG- 65061 |||| || || ||| | ||||||||||||| ||||| | | ||| || | | Sbjct 3473262 AAACCGTTCCTTGTGTCGAGAAGAAGGCGACTTGGGCCCT----TCGTTGGATCGATGGT 3473317 Query 65062 TCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCC 65121 ||| || ||||| ||| | || | || ||||| || ||||| ||||| || ||||| Sbjct 3473318 TCTGAGTCGTTCGCAGAGAGGCTACTGGCTTTTGCCTGCGTGGAAGGTATATTTTTCTCG 3473377 Query 65122 GGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTC 65181 || ||||| || || | |||||||| ||| ||||||| ||||| || | |||| Sbjct 3473378 GGAAGCTTCTGTGCAATATTCTGGTTGAAAAAGAGGGGTCTGATGCCCGGGTTGACCTTC 3473437 Query 65182 TCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTC 65241 || ||||| || |||||||| ||||||||| | || || || || ||||| Sbjct 3473438 TCCAATGAGCTCATTTCCCGGGATGAGGGTTTACATTGTGACTTCGCTTGCTTGCTCT-- 3473495 Query 65242 AAGACTTTGCGTAA---TAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCG 65298 | | | ||| ||| | | | | ||||| | |||| ||||| || || Sbjct 3473496 -ATAGTCTGCTTAAAGTGAAGCTTAGTGAAGAAACGGTGCACGGGCTCGTGGCGGATGCA 3473554 Query 65299 GTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAAC 65358 || || ||||| | | ||| | | || || | || || | || | || ||||| Sbjct 3473555 GTGGATATTGAAAGGGAGTTTGTTTGTGATGCGTTGCCGTGCAGGCTGTTGGGAATGAAT 3473614 Query 65359 TCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGG 65418 || ||| ||||| | | ||||| |||| ||| ||||| | | | | ||||| Sbjct 3473615 TCAGAGTTGATGTGCCAATACATAGAGTTCGTGGCGGATAGATTGTTGGTTGCA-TTGGG 3473673 Query 65419 GTGCCA-CCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGA 65477 || | | | | || || |||| || || |||| |||||| ||| ||| | | Sbjct 3473674 GTACAAGAAGCTGTACAATGCACAGAACCCCTTCGACTGGATGGAACTCATAAGCTTGCA 3473733 Query 65478 TGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||||| || ||||| |||| ||||||||| || || Sbjct 3473734 GGGGAAGACAAATTTCTTCGAGAGGCGAGTTGGTGAGTA 3473772 >seq412 Length=943016 Score = 96.9 bits (106), Expect = 4e-15 Identities = 294/449 (65%), Gaps = 4/449 (1%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT-GGTGCCAAGATCCC 175289 ||| | ||||| || || ||| |||| ||||| | || | || ||||| || || Sbjct 349890 GAGGTGGTGGAGTTCCTAAAGAAACCAGAGAGGT-TTACAGCGGTCGGTGCTCGCATTCC 349948 Query 175290 CCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCAT 175349 ||||| |||||| | ||| ||||| || ||||||||| | | || ||||| Sbjct 349949 GAAAGGCGTCCTTCTTGTTGGTCCACCAGGCACTGGAAAGACCTTGTTGGCTAAGGCCAT 350008 Query 175350 CGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGT 175408 || || ||| | || |||||| || || | ||||| | | ||||| || |||| Sbjct 350009 TGCTGGCGAAGCTGGGGTGCCATTCTTCTCAAT-CTCTGGTTCCGAGTTTGTCGAAATGT 350067 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468 |||| || || ||||| || || || ||||| || | | || ||||| | Sbjct 350068 TTGTGGGAGTTGGTGCTTCCAGAGTCCGTGATCTTTTCAAGAAGGCAAAGGAAAACGCCC 350127 Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTA 175528 | || || ||||| | || || |||||||| ||||| ||| | | ||||| | Sbjct 350128 CCTGCATCGTCTTTGTGGACGAAATTGATGCTGTGGGTCGTCAAAGGGGAACTGGTATTG 350187 Query 175529 TGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCT 175588 | || || || || ||||| || | || ||||| || || ||||||||||||| Sbjct 350188 GAGGGGGGAACGATGAAAGGGAACAGACTCTGAACCAACTCCTAACTGAGATGGATGGCT 350247 Query 175589 TTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATG 175648 | || | || ||||| | || ||||| || || ||||| | |||||||| ||| Sbjct 350248 TCGAAGGGAACACCGGCATCATCGTCATTGCTGCAACCAATCGTGCAGATATCCTGGATT 350307 Query 175649 ACGCCCTCCTTCGCCCGGGTCGTTTTGAT 175677 || ||||| | || || | |||||| Sbjct 350308 CTGCACTCCTGAGGCCTGGAAGGTTTGAT 350336 >seq507 Length=3453940 Score = 84.2 bits (92), Expect = 3e-11 Identities = 291/449 (65%), Gaps = 4/449 (1%) Strand=Plus/Minus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT-GGTGCCAAGATCCC 175289 ||| ||||||| || || ||| |||| ||||| | | | ||| ||||| || || Sbjct 2566398 GAGGTTGTGGAATTCCTGAAGAAACCAGAGAGGT-TCACAGCAGTCGGTGCTCGCATTCC 2566340 Query 175290 CCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCAT 175349 ||| | ||||| | ||| || ||||| ||||||||| | || ||| || || Sbjct 2566339 TAAAGGTGTTCTTCTTGTTGGTCCACCGGGTACCGGAAAGACCTTACTGGCCAAGGCTAT 2566280 Query 175350 CGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGT 175408 || |||||| || || ||||| || || | ||| | | | ||||| || |||| Sbjct 2566279 TGCTGGTGAAGCAGGAGTGCCATTTTTCTCAAT-CTCCGGTTCCGAGTTTGTCGAAATGT 2566221 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468 | || || || ||||| | || || ||||| || | | || || || | Sbjct 2566220 TCGTGGGGGTTGGTGCTTCTCGAGTCCGTGATCTTTTCAAGAAAGCAAAGGAGAACGCCC 2566161 Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTA 175528 | || |||||||| | ||||| || ||||| || ||| ||| | || ||||| | Sbjct 2566160 CCTGCATTGTCTTTGTGGATGAAATCGATGCAGTTGGCCGTCAAAGAGGCACTGGTATTG 2566101 Query 175529 TGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCT 175588 || || || ||||| || || || | || || || | |||||||||||||||| Sbjct 2566100 GAGGAGGTAACGATGAGAGGGAGCAGACTCTGAACCAGCTCTTAACCGAGATGGATGGCT 2566041 Query 175589 TTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATG 175648 |||| | || || || | || || || || ||||| || | |||||||| || Sbjct 2566040 TTGAAGGGAACACCGGTATCATCGTCATAGCTGCAACTAACCGTGCAGATATCCTCGACT 2565981 Query 175649 ACGCCCTCCTTCGCCCGGGTCGTTTTGAT 175677 |||| | || | || || | |||||| Sbjct 2565980 CCGCCTTGCTAAGGCCCGGAAGGTTTGAT 2565952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565737211840