Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq518 522 8e-144 seq517 462 6e-126 >seq518 Length=172489 Score = 522 bits (578), Expect = 8e-144 Identities = 710/988 (72%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 |||||||| |||||||||||||| ||||| ||||| || ||||| ||||||||||| || Sbjct 15571 AGAAGCTAGATCTAGAGGAAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 15630 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | ||| | || ||||||||||||| ||| || ||| | | || ||||| Sbjct 15631 GTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTAC 15690 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||||||||| |||||||| ||||| |||||||| || ||||| | | || Sbjct 15691 AGATTGGTTAAAGTTGAAACCATTTAGGTTGAAAGCCATTGTGCTAATACCTAAAGCAGT 15750 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTT 40768 || ||| || || | || || ||||| | | |||||||||| || ||| ||||| Sbjct 15751 AAACCAAATACCCACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTT 15810 Query 40769 GAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATA 40828 ||| ||||||||| || || | || ||||| ||||| || |||||||| || ||||| Sbjct 15811 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATA 15870 Query 40829 AGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTC 40888 ||| || | || ||||| || || || || | || |||||| |||| ||||| || Sbjct 15871 AGTTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 15930 Query 40889 CCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAA 40948 || || | ||||| || | | || ||||||||| ||| | | || || || Sbjct 15931 CCTGATCAAACTTGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCGCCGAA 15990 Query 40949 GACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAA 41008 || || || || || | ||| || ||||||||||| || |||||||| || || ||||| Sbjct 15991 TACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 16050 Query 41009 GACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACC 41068 |||| ||| || ||||| || ||| ||||||||||||||||||||||| ||| || Sbjct 16051 TACAATCATAAAATTGAAAGTACCAGAAATTCCTAAAGGCATACCATCAGAAAAACTTCC 16110 Query 41069 CTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGC 41128 ||||| | ||| || | ||||| || || ||| |||| | ||||||| ||||| Sbjct 16111 TTGACCTATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 16170 Query 41129 CACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTA 41188 ||| ||||| |||| |||||| || | | | ||||||||||| | ||| ||| Sbjct 16171 AACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTA 16230 Query 41189 TGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAG 41248 ||||| || | ||| ||||| | || || |||| ||| || || |||||||||| Sbjct 16231 ACAAGCTACACCAAGTAAGAAGTGTAGAACTATTAGTTCATAAGGACCACCGTTGTATAA 16290 Query 41249 CCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGA 41308 ||| ||||| | | | ||||||||||||||||| || || | ||||| || || Sbjct 16291 CCATTCGTCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCGATAGCTGCTGA 16350 Query 41309 GCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGG 41368 | |||| | || ||||| ||||||||||| ||||| | || || || ||||| || Sbjct 16351 AGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGG 16410 Query 41369 CTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATG 41427 ||||| || ||||| |||||||| || || || || || || || || || || ||| | Sbjct 16411 TTCACGAATACCATCAATATCTACCGGAGGAGCAGCAATGAACGCAATAATAAATACA-G 16469 Query 41428 TGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGT 41487 || || || | ||| | |||||||| | ||||||||||| || | ||| || || | Sbjct 16470 AAGTTGCGGTCAATAAGGTAGGAATCATCACAACACCAAACCAGCCAATGTAAAGACGAT 16529 Query 41488 TGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | |||||||| || | ||||||||| || Sbjct 16530 TTTCGGTGCTGGTTATCCAGTTACAGAA 16557 Score = 522 bits (578), Expect = 8e-144 Identities = 710/988 (72%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 |||||||| |||||||||||||| ||||| ||||| || ||||| ||||||||||| || Sbjct 165600 AGAAGCTAGATCTAGAGGAAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 165659 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | ||| | || ||||||||||||| ||| || ||| | | || ||||| Sbjct 165660 GTTAGCACGGTTGATAATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTAC 165719 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||||||||| |||||||| ||||| |||||||| || ||||| | | || Sbjct 165720 AGATTGGTTAAAGTTGAAACCATTTAGGTTGAAAGCCATTGTGCTAATACCTAAAGCAGT 165779 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTT 40768 || ||| || || | || || ||||| | | |||||||||| || ||| ||||| Sbjct 165780 AAACCAAATACCCACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTT 165839 Query 40769 GAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATA 40828 ||| ||||||||| || || | || ||||| ||||| || |||||||| || ||||| Sbjct 165840 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATA 165899 Query 40829 AGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTC 40888 ||| || | || ||||| || || || || | || |||||| |||| ||||| || Sbjct 165900 AGTTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 165959 Query 40889 CCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAA 40948 || || | ||||| || | | || ||||||||| ||| | | || || || Sbjct 165960 CCTGATCAAACTTGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCGCCGAA 166019 Query 40949 GACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAA 41008 || || || || || | ||| || ||||||||||| || |||||||| || || ||||| Sbjct 166020 TACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 166079 Query 41009 GACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACC 41068 |||| ||| || ||||| || ||| ||||||||||||||||||||||| ||| || Sbjct 166080 TACAATCATAAAATTGAAAGTACCAGAAATTCCTAAAGGCATACCATCAGAAAAACTTCC 166139 Query 41069 CTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGC 41128 ||||| | ||| || | ||||| || || ||| |||| | ||||||| ||||| Sbjct 166140 TTGACCTATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 166199 Query 41129 CACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTA 41188 ||| ||||| |||| |||||| || | | | ||||||||||| | ||| ||| Sbjct 166200 AACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTA 166259 Query 41189 TGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAG 41248 ||||| || | ||| ||||| | || || |||| ||| || || |||||||||| Sbjct 166260 ACAAGCTACACCAAGTAAGAAGTGTAGAACTATTAGTTCATAAGGACCACCGTTGTATAA 166319 Query 41249 CCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGA 41308 ||| ||||| | | | ||||||||||||||||| || || | ||||| || || Sbjct 166320 CCATTCGTCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCGATAGCTGCTGA 166379 Query 41309 GCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGG 41368 | |||| | || ||||| ||||||||||| ||||| | || || || ||||| || Sbjct 166380 AGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGG 166439 Query 41369 CTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATG 41427 ||||| || ||||| |||||||| || || || || || || || || || || ||| | Sbjct 166440 TTCACGAATACCATCAATATCTACCGGAGGAGCAGCAATGAACGCAATAATAAATACA-G 166498 Query 41428 TGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGT 41487 || || || | ||| | |||||||| | ||||||||||| || | ||| || || | Sbjct 166499 AAGTTGCGGTCAATAAGGTAGGAATCATCACAACACCAAACCAGCCAATGTAAAGACGAT 166558 Query 41488 TGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | |||||||| || | ||||||||| || Sbjct 166559 TTTCGGTGCTGGTTATCCAGTTACAGAA 166586 >seq517 Length=283823 Score = 462 bits (512), Expect = 6e-126 Identities = 702/993 (71%), Gaps = 12/993 (1%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 |||||||| |||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct 137442 AGAAGCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 137501 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | ||| | || ||| ||||||||| ||| || ||| ||| || ||||| Sbjct 137502 GTTAGCACGGTTGATAATATCCGCCCAAGTATTAATTACACGACCTTTACTCTCAACTAC 137561 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||||||||| |||| |||| |||||||| || ||||| | | | Sbjct 137562 AGATTGGTTAAAGTTTCAACCTAAATGGTTGAAAGCCATTGTGCTAATACCTAAG----T 137617 Query 40709 AAGCCATAT-GCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 || ||| || |||| || | || ||||| | | |||||||||| | ||| |||| Sbjct 137618 AAACCAAATAGCCACTA-CAGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGT 137676 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 |||| ||||||||| || || | || ||||| ||||| || |||||||| || |||| Sbjct 137677 TGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTAT 137736 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 |||| || | || ||||| || || || || | || |||||| |||| ||||| | Sbjct 137737 AAGTTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTT 137796 Query 40888 CCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAA 40947 ||| || | ||||| || | | || ||||||||| ||| | | || || | Sbjct 137797 CCCTGATCAAACTTGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCGCCGA 137856 Query 40948 AGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGA 41007 | || || || || || | ||| || ||||||||||| || |||||||| || || |||| Sbjct 137857 ATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 137916 Query 41008 AGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAAC 41067 | |||| ||| || | ||| || ||| ||||||||||||||||||||||| ||| | Sbjct 137917 ATACAATCATAAAATGGAAAGTACCAAAAATTCCTAAAGGCATACCATCAGAAAAACTTC 137976 Query 41068 CCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATG 41127 | ||||| | ||| || | ||||| ||||| |||||| | | ||||||| |||| Sbjct 137977 CTTGACCAATTGGGTAGATCAAGAAAACAGCGGTAGCTGCAGCAACAGGAGCTGAATATG 138036 Query 41128 CCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGT 41187 | ||| ||||| |||| |||||| || | | | ||| ||||||| | ||| || Sbjct 138037 CAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGCTCCCACTCACGACCCATGT 138096 Query 41188 ATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATA 41247 | ||||| || | ||| ||||| | ||||| |||| ||| || || |||||||||| Sbjct 138097 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATA 138156 Query 41248 GCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAG 41307 ||| ||||| | | | ||||||||||||||||| || || | ||||| || | Sbjct 138157 ACCATTCGTCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCGATAGCTGCTG 138216 Query 41308 AGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGT----ACATTAACGAGCCGGAA 41363 | | |||| | || ||||| || |||||||| || | | | || || || ||| Sbjct 138217 AAGTAGGAATAATGGCACCAGAAATCATATTGTTTCCATAAAGAAAGTAGAGATCCAGAA 138276 Query 41364 ACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAAA 41423 || || ||||| || ||||| |||||||| || || ||||| || || || | || |||| Sbjct 138277 ACAGGTTCACGAATACCATCAATATCTACCGGAGGAGCTGCAATGAACGCTA-TAAGAAA 138335 Query 41424 CA-TGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAG 41482 | | || || || | ||| | |||||||| | |||||||||||||| | ||| || Sbjct 138336 TACAGAAGTTGCGGTCAATAAGGTAGGAATCATCAAAACACCAAACCAACCAATGTAAAG 138395 Query 41483 GCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || || ||||||| || | ||||||||| || Sbjct 138396 ACGATTTTCGGTGCAGGTTATCCAGTTACAGAA 138428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143701516050612