Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3 105 1e-17 seq1 86.0 1e-11 >seq3 Length=5347415 Score = 105 bits (116), Expect = 1e-17 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || || |||| ||||| || | ||||| || || |||||| Sbjct 3172817 ATACCACCACGGAGGCGGAGGACCAAGTGCAAGGTCGATTCTTTCTGGATGTTGTAGTCG 3172876 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | ||| || | ||| || ||||||||||| | || || ||||| || Sbjct 3172877 GCAAGGGTACGACCATCCTCGAGTTGCTTGCCGGCAAAAATCAGCCTTTGCTGATCCGGG 3172936 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| || || || || |||| ||| | ||| ||| || |||||| || Sbjct 3172937 GGAATTCCTTCCTTGTCCTGGATCTTGGCTTTAACATTGTCAATGGTGTCGGAACTTTCC 3172996 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATTAGTA 193370 || || || || || ||||| ||||| || ||||| || || || ||||| | | || | Sbjct 3172997 ACCTCGAGGGTGATTGTTTTTCCTGTGAGGGTTTTCACGAAGATCTGCATCTGTTGAGCA 3173056 Query 193371 AAA 193373 ||| Sbjct 3173057 AAA 3173059 >seq1 Length=8502017 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || || ||||| | |||| || || ||| || ||||||| | ||| | | Sbjct 712094 CGGAGCACAAGATGGAGCGTAGATTCCTTTTGAATGTTGTAGTCGGCGAGCGTCCGTCCA 712153 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | || || ||||| || || || | ||| ||||| ||||| || ||||| || Sbjct 712154 TCCTCAAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGATCGGGAGGGATCCCTTCCTTG 712213 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| || | || || || ||||||||||| || || || || || Sbjct 712214 TCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAAGACTCCACCTCCAGCGTAATC 712273 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| ||||| || || || ||||| Sbjct 712274 GTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 712308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648574737760