Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 150 5e-31 seq414 120 9e-22 seq507 87.8 5e-12 >seq1 Length=8502017 Score = 150 bits (166), Expect = 5e-31 Identities = 236/334 (71%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 302545 ACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATA 302604 || ||| |||||| || ||| || || ||||| ||| | | || | ||||||| Sbjct 1381862 ACAGTCCCATCATATTTAACCATGATATCCTCCATTGCCTTCACCAGTCGCCTCTGAATA 1381803 Query 302605 TAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCA 302664 ||||| || || ||||| ||||| |||||||| ||||| | | ||||||||| ||| Sbjct 1381802 TAACCTGTCTCGGAGGTTTTCACAGCAGTATCAATAAGACCTTCTCTACCACCCATGGCA 1381743 Query 302665 TGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGC 302724 |||||||| | ||||| || | |||| | | ||||| |||| || || ||||| Sbjct 1381742 TGGAAGAAGAACTCTTGAGGAGACAAGCCCCTGAGATAGGAGTTCTCCACAAATCCACGG 1381683 Query 302725 GCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCAT--AGCCGT 302782 ||| || || || |||||| || ||||| || || | | ||| || |||| Sbjct 1381682 CTCTCAGGACCATAATCATCCTTGGTGAAATGTGGTAGAGTAC-GATCT-ATGAAGCCAA 1381625 Query 302783 ATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATAT 302842 | ||||| || ||||| || || |||||||| |||| || | | ||||||| ||||||| Sbjct 1381624 AGGGGATTCGTTTTCCTTCCACATTCTGCTGCCCCACACAAGCAGTCATCTGTGAAATAT 1381565 Query 302843 TTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 | | | ||| |||||||| || ||| | ||||| Sbjct 1381564 TGATAAAACTTCCCTTGGAACCTGCAGTCACCAT 1381531 Score = 84.2 bits (92), Expect = 6e-11 Identities = 213/318 (67%), Gaps = 6/318 (2%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| ||||||||| || ||||||||||| | | || | ||| || || | Sbjct 575788 ACCAATAGCATCAATCTCATCAATGAAAATAATGCTAGGTGCGCATTGCCTTGCTTCTTG 575847 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 ||||| | | || | || | ||||| |||||| |||| || | ||| |||||| | Sbjct 575848 AAATAGGTTCCGAACCCTTGAAGGTCCAACCCCAACAAACATCTCCATAAAGTCAGAACC 575907 Query 289149 GGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 || | |||| | || | ||| | ||| || ||| ||| | |||| || || | Sbjct 575908 AGAGA-TTGACAGAAAAGGCACACCAGATTCACCAGCTGTTGCTTTTGCCAAGAGAGTTT 575966 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGAC 289266 |||| || ||||| || || | | || | | || ||||| | ||| || |||| | | Sbjct 575967 TACCAGTCCCAGGAGGCCCAACCAGTAAAGCACCTTTTGGGATTTTGGCACCCA--ACTC 576024 Query 289267 TT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 || ||| |||| |||| | || | ||| | |||| ||| || || | |||||| || Sbjct 576025 TTCATACTTCTTAGGGTTTTTAAGAAAGTGCACAAACTCCATAATCTCTTCTTTTGCTTC 576084 Query 289326 ATCACATCCTGCTACATC 289343 |||||| || || ||||| Sbjct 576085 ATCACAGCCAGCAACATC 576102 >seq414 Length=5667865 Score = 120 bits (132), Expect = 9e-22 Identities = 282/417 (68%), Gaps = 14/417 (3%) Strand=Plus/Plus Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 ||||||||||| ||||| | ||||| | || || || | |||||||||| ||| Sbjct 2159310 AATCCATCCATTTCAGTTAATAGCTGATTGATAGTCTGCTCTCGTTCATCATTTCCACCA 2159369 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 | || | || || ||| || || ||| ||||||||||||| ||||| || | Sbjct 2159370 CC--AAGC--CCAGCTC-CTCGTTGCCTTCCCA-CAGCATCAATTTCATCAATAAAGACA 2159423 Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGA 289119 | || || | || | || | |||| || || ||||| | || ||||||| | Sbjct 2159424 ATGCAAGGGGCCTTGGACTTGGCTTTCTCAAACAAATCCCTTACTCTTGAGGCTCCAACA 2159483 Query 289120 CCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTC 289178 || ||| ||| || |||||||| ||||| | | || | |||| ||| |||||| Sbjct 2159484 CCCACAAACAGCTCCACAAATTCTGAAGCTGCG-CAGGAGAAAAATGGAACACCTGCTTC 2159542 Query 289179 GCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAAC 289238 || || |||||||| |||||||| ||||| || ||||| ||||| || | || ||| Sbjct 2159543 TCCGGCCACTGCCCTGGCCAGAAGGGTCTTTCCCGTTCCTGGTGGACCGACCAAAAGACA 2159602 Query 289239 TCCCTTTGGTACTTTTGCCCCA---GCAGACTTATATTTCTCAGGGCTCTTTAAAAATTC 289295 || || || | |||||| || |||| | || || |||||| | || || || || Sbjct 2159603 GCCTTTGGGGATTTTTGCACCTAAGGCAG---TGTACTTGTCAGGGTTTTTCAAGAAATC 2159659 Query 289296 TACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 |||| ||| | || || | || || | |||| || || ||||||||||| || Sbjct 2159660 AACAACTTCTTGGAGCTCCAACTTGGCTTGATCAGCCCCAGCAACATCAGCAAATGT 2159716 >seq507 Length=3453940 Score = 87.8 bits (96), Expect = 5e-12 Identities = 82/104 (79%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 156050 ACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAG 156106 ||| |||||||| ||||| ||||| |||||||| ||||| | |||||| || | || Sbjct 789383 ACCTTTCCTCTTTCCACCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAG 789442 Query 156107 CATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATAT 156150 |||||||||||| ||||| || || ||||| || || || |||| Sbjct 789443 CATAGGAATAATTCCATTCGATGTCCCATTTGTACCACGTATAT 789486 Score = 87.8 bits (96), Expect = 5e-12 Identities = 82/104 (79%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 156050 ACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAG 156106 ||| |||||||| ||||| ||||| |||||||| ||||| | |||||| || | || Sbjct 792232 ACCTTTCCTCTTTCCACCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAG 792173 Query 156107 CATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATAT 156150 |||||||||||| ||||| || || ||||| || || || |||| Sbjct 792172 CATAGGAATAATTCCATTCGATGTCCCATTTGTACCACGTATAT 792129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471807831730566