Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq414 158 1e-32 seq415 104 3e-16 seq3 86.0 8e-11 >seq414 Length=5667865 Score = 158 bits (174), Expect = 1e-32 Identities = 226/313 (72%), Gaps = 4/313 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||| || || || ||||||||||||||||| || | |||| | || ||| Sbjct 3473187 GAGTGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGG 3473128 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 |||||||||||||||| | | || || || ||| |||||| |||||| |||||||||| Sbjct 3473127 ACCTCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGAAA 3473068 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTC-GTCGCTGAGCGACACCCAGTGGAC 869811 ||||| || | || ||||| || || ||||| | || | || || |||||| | Sbjct 3473067 AAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACG-TCAGAGAGTACCAGTGAGC 3473009 Query 869812 GGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 | || || || |||||||| || ||||||| ||||| || || || ||||| Sbjct 3473008 GAGATCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGTA 3472949 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCG 869931 ||||||||| | ||| |||| | || ||||| | | ||||| | | ||| | | | Sbjct 3472948 CATCTCCCAGATTTGAGGGTACTGAATTGGGAACATGCAGAAGCGATCTGCGTT-TGGGG 3472890 Query 869932 CAA-CAGGGGTTC 869943 ||| |||||||| Sbjct 3472889 CAAGGAGGGGTTC 3472877 Score = 123 bits (136), Expect = 3e-22 Identities = 208/296 (70%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| || || || || || |||||||| || ||||| ||||| |||| | || ||| Sbjct 274709 GAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACCTGG 274650 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 |||||||||||||| | | | ||||| |||||| ||||| || ||| || ||||| Sbjct 274649 ACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCGAAG 274590 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || || || || ||||| || || |||||| | || || ||||| |||| Sbjct 274589 AAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGT-GACG 274531 Query 869813 GTG-TC-GGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 | | || | | | | || || || || || ||||| | || ||||| ||||| |||| Sbjct 274530 GAGATCTTGTGAT-AAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTGT 274472 Query 869871 ACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTG 869926 |||||||||| | || |||| | || ||||| | | ||||| | |||||| Sbjct 274471 ACATCTCCCAGATTTCAGGGTACTGAATTGGGAACATGCAGAAGCGATCAGGGTTG 274416 >seq415 Length=3446356 Score = 104 bits (114), Expect = 3e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||| |||||||| |||| || ||| ||| | | |||||| || Sbjct 2281439 GCTGCCAACTACCTGAACATCAAGAGCTTGCTTGACCTTACCTGCCAAACCGTGGCCGAC 2281498 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || ||||||||||| |||||||||||||||||| ||| Sbjct 2281499 ATGATCAAGGGGAAGACTCCAGAGGAGATCCGAAAGACCTTTAACATCAAGAACG 2281553 >seq3 Length=5347415 Score = 86.0 bits (94), Expect = 8e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||||| |||||||| |||| || || ||| | ||||||| || Sbjct 3243475 GCTGCAAACTACCTGAACATCAAGAGCTTGCTTGACCTGACATGCCAAACTGTGGCTGAC 3243534 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||| || ||| | || ||||||||||| ||||||||||| |||||| ||| Sbjct 3243535 ATGATCAAAGGGAAGACCCCGGAGGAGATCCGAAAGACCTTTAATATCAAGAACG 3243589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107096690494206