Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq415 87.8 1e-12 seq413 87.8 1e-12 seq3 87.8 1e-12 >seq415 Length=3446356 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || || || ||||| | ||||| || || || ||| | || |||| Sbjct 2240303 AATGCAGATTTTCGTGAAAACGCTCACCGGAAAGACGATCACCTTGGAGGTGGAGAGCTC 2240244 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| ||| | | || || |||||| ||||| || || | ||| ||||| Sbjct 2240243 TGATACTATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCAGATCA 2240184 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || ||||| | || || || |||||||| |||| || || |||| |||||||| Sbjct 2240183 GCAGAGGCTTATCTTCGCAGGGAAGCAGCTGGAAGATGGGAGGACCTTGGCTGATTACAA 2240124 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| ||||| || || | ||| | ||| | | || || ||||| Sbjct 2240123 CATTCAGAAAGAGTCCACCCTTCACCTTGTGCTCCGTCTTCGTGGGGG 2240076 >seq413 Length=2569514 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 || || |||||| | || ||||| |||||||| || | ||| || || | | |||| Sbjct 725043 GAGAAGGAAGGCATCCCTCCTGATCATCAAAGACTAATATTTGCTGGCAAGCTGTTGGAA 725102 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| ||| || |||| |||||||||||||| ||||||||||| | ||| | || || Sbjct 725103 GATGGCAGGACTTTGGCTGATTACAACATTCAGAAAGAATCTACCCTCCACCTTGTTTTG 725162 Query 110486 AGACTGCGAGGGGGAA 110501 || ||| | || |||| Sbjct 725163 AGGCTGAGTGGAGGAA 725178 >seq3 Length=5347415 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAA--ACGGAGCCTG 110330 ||||| || |||||||| ||| |||| ||||| ||||||||| ||||| | |||| | Sbjct 3172590 ATGCAGATCTTTGTCAAGACTCTAACTGGCAAGACCATTACCCTCGAAGTAGAGAGCTCG 3172531 Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390 || || ||| | | || || || ||| || || |||||| | || ||| | Sbjct 3172530 --GACACCATCGACAACGTGAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCGGACC 3172473 Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450 | || || | || | ||| || || ||||||||||| | | ||| |||| || |||| Sbjct 3172472 AGCAGAGGTTGATCTTTGCAGGAAAGCAGCTGGAGGACGGGCGCACATTGGCTGACTACA 3172413 Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||| || || || || | ||| |||| |||| ||| |||| |||| Sbjct 3172412 ACATCCAGAAGGAGAGCACTCTCCACTTGGTCCTAAGGCTGAGAGGTGGAA 3172362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838993679374