Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq414 118 2e-20 seq415 91.5 2e-12 >seq414 Length=5667865 Score = 118 bits (130), Expect = 2e-20 Identities = 170/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | || ||||||||||||||||| | | | || || || || |||||| ||| Sbjct 3473142 GCCTCCGAAACCTGGACCTCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCG 3473083 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC-GTCGCTGAG 796268 ||| |||||||||||| || || | || ||||| || || ||||| | || | || Sbjct 3473082 TCGGAGGCGGCGAAAAAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACG-TCAG 3473024 Query 796269 CGAGACCCAGTGGACCGTG-TCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 ||| |||||| | || | || | | | || ||||||||||| || ||||| |||||| Sbjct 3473023 AGAGTACCAGTG-AGCGAGATCTTGAGAC-AGATCGACCTCCTCCGCCGTCCAGAAGGAG 3472966 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 || || || || |||||||||||||| || | |||| | || ||||||| Sbjct 3472965 GCTTCTGCTTTCTTGTACATCTCCCAGATTTGAGGGTACTGAATTGGGAACA 3472914 Score = 95.1 bits (104), Expect = 2e-13 Identities = 192/284 (68%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAG 794439 |||||||| || || | ||| || | ||| || || |||||||| || ||||||||||| Sbjct 3473427 CCGGGCATCAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAAT 3473368 Query 794440 ATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTG 794499 || || || ||| |||||| | | |||| ||| || || | | ||| || Sbjct 3473367 ATACCTTCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAACGACT-CAGAACC-----A 3473314 Query 794500 TTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG 794559 | |||||| | ||||| ||||| ||| || | || || || || || || Sbjct 3473313 TCGATCCAACGAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCA 3473254 Query 794560 CGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAG 794619 || ||||| | ||| || | | ||||||| ||| || || | || || || Sbjct 3473253 CGGAAGAGCCTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATAC 3473194 Query 794620 GTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAA 794663 |||| |||||||||||||| || || ||||||||||| ||||| Sbjct 3473193 ATCTCAGAGTGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAA 3473150 Score = 86.0 bits (94), Expect = 1e-10 Identities = 164/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 || || ||||||||||| |||||||| || |||||| | |||| ||| || | | | Sbjct 5016868 TTTGTAACGGCCTTGGTTCCCTCTGAAACAGCGTGCTTCGCCAATTCCCCAGGAAGAACA 5016927 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGT--GTTGCGCTTGTTAGTGCGCG 1485592 || | || || || ||||||||||||| | || || ||| ||||||| |||| Sbjct 5016928 AGTCTTACAGCAGTTTGGATCTCGCGGGAGGTAATGGTCGGTT--TCTTGTTATACCGCG 5016985 Query 1485593 CCAGGCGGCCGGCCTC-GGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 ||| || || || | ||| || |||| || ||||||| ||| |||||| Sbjct 5016986 CCAATCGCGATGCTTCTTGCGCCAAT-TTCTCGAAAATATCGTTGATAAAGCTGTTCATA 5017044 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||| ||||| ||| | || ||||| | || ||||| |||||||| | |||||| Sbjct 5017045 ATCCCCATCGCCTTGCTCGATATGCCAATATCAGGGTGGACCTGCTTCAAAACCTTG 5017101 >seq415 Length=3446356 Score = 91.5 bits (100), Expect = 2e-12 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||||| |||||||| | | || || | ||| | ||||||||| || Sbjct 2281439 GCTGCCAACTACCTGAACATCAAGAGCTTGCTTGACCTTACCTGCCAAACCGTGGCCGAC 2281498 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||| ||| | || ||||| ||||| |||||||||||||||||| ||| Sbjct 2281499 ATGATCAAGGGGAAGACTCCAGAGGAGATCCGAAAGACCTTTAACATCAAGAACG 2281553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916191297977402