Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12]
518 sequences; 100,688,548 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 1e-19
seq415 102 7e-17
seq255 87.8 1e-12
>seq3
Length=5347415
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || |||||||| ||| |||| ||||| ||||||||| ||||| ||| ||| |
Sbjct 3172590 ATGCAGATCTTTGTCAAGACTCTAACTGGCAAGACCATTACCCTCGAAGTAGAGAGCTCG 3172531
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || ||| | | || || || ||| ||||| |||||| | || ||| ||
Sbjct 3172530 -GACACCATCGACAACGTGAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCGGACCA 3172472
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| | || | ||| || || ||||||||||||| ||| |||| ||||||||
Sbjct 3172471 GCAGAGGTTGATCTTTGCAGGAAAGCAGCTGGAGGACGGGCGCACATTGGCTGACTACAA 3172412
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || |||||| || | ||| |||| | || || |||| ||||
Sbjct 3172411 CATCCAGAAGGAGAGCACTCTCCACTTGGTCCTAAGGCTGAGAGGTGGAA 3172362
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || |||||||| ||| |||| ||||| ||||| || | ||| |||| |||
Sbjct 3172818 ATGCAGATCTTTGTCAAGACTCTAACTGGCAAGACCATAACTCTTGAAGTGGAGAGCTCT 3172759
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || ||| | | || || ||||| ||||| ||||| | ||| || ||
Sbjct 3172758 -GACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCA 3172700
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||||||| || | || || || ||||| ||||| | | || | || || || ||
Sbjct 3172699 GCAGAGACTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCCGATTATAA 3172640
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764
||| ||||||||||| ||| | ||| ||||
Sbjct 3172639 CATCCAAAAGGAGTCCACGCTCCACTTGGT 3172610
>seq415
Length=3446356
Score = 102 bits (112), Expect = 7e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAA-CGGAGGCTGG 107614
||||| || |||||||| ||| | ||||| |||||||| ||| | || || | ||| |
Sbjct 2240530 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATCACCCTTGAGGTCGAAAGCTCG 2240471
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| ||| | | || || |||||| ||||| || || | ||| ||||||
Sbjct 2240470 -GATACGATCGACAATGTGAAGGCGAAGATTCAGGATAAGGAGGGAATCCCCCCGGATCA 2240412
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| | || | ||| || || ||||| ||||||| || |||||||||||||
Sbjct 2240411 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGCACCTTGGCGGACTACAA 2240352
Query 107735 CATTCAAAAGGAG 107747
||| |||||||||
Sbjct 2240351 CATCCAAAAGGAG 2240339
Score = 102 bits (112), Expect = 7e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || |||||||| ||| | || ||||| ||||| ||| | ||| ||| ||| |
Sbjct 2241214 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATAACCCTTGAAGTTGAGAGCTCG 2241155
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| | | | | || || |||||| || || ||||| | ||| ||| ||
Sbjct 2241154 -GACACTATTGACAACGTTAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGACCA 2241096
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| ||||| | ||| ||||| ||||| ||||| | | || | || ||||||||
Sbjct 2241095 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAGGATGGCCGCACCCTCGCAGACTACAA 2241036
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764
||| || || || || || |||||| ||||
Sbjct 2241035 CATCCAGAAAGAATCAACCTTGCACTTGGT 2241006
>seq255
Length=3424836
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/204 (71%), Gaps = 3/204 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| || ||||| |||||| | || || || || || ||| | || ||| |||
Sbjct 2253879 ATGCAGATCTTTGTGAAAACTCTTACCGGAAAGACAATCACCCTTGAGGTGGAAAGCTC- 2253821
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| ||| | | || || ||||| ||||| ||||| | ||| | | ||
Sbjct 2253820 CGATACCATCGACAACGTCAAGGCTAAGATCCAGGATAAGGAAGGAATCCCCCCG-ACCA 2253762
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||| |||||||| | || || ||||||||||| |||| | || | || ||||||||
Sbjct 2253761 GCAAAGACTTATCTTCGCAGGAAAACAGCTGGAAGACGGCCGCACCCTCGCCGACTACAA 2253702
Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758
|||||| |||||||| || ||||
Sbjct 2253701 CATTCAGAAGGAGTCAACCCTGCA 2253678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398874281840902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |