Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 seq415 102 7e-17 seq255 87.8 1e-12 >seq3 Length=5347415 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || |||||||| ||| |||| ||||| ||||||||| ||||| ||| ||| | Sbjct 3172590 ATGCAGATCTTTGTCAAGACTCTAACTGGCAAGACCATTACCCTCGAAGTAGAGAGCTCG 3172531 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | || || || ||| ||||| |||||| | || ||| || Sbjct 3172530 -GACACCATCGACAACGTGAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCGGACCA 3172472 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | || | ||| || || ||||||||||||| ||| |||| |||||||| Sbjct 3172471 GCAGAGGTTGATCTTTGCAGGAAAGCAGCTGGAGGACGGGCGCACATTGGCTGACTACAA 3172412 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| || |||||| || | ||| |||| | || || |||| |||| Sbjct 3172411 CATCCAGAAGGAGAGCACTCTCCACTTGGTCCTAAGGCTGAGAGGTGGAA 3172362 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || |||||||| ||| |||| ||||| ||||| || | ||| |||| ||| Sbjct 3172818 ATGCAGATCTTTGTCAAGACTCTAACTGGCAAGACCATAACTCTTGAAGTGGAGAGCTCT 3172759 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | || || ||||| ||||| ||||| | ||| || || Sbjct 3172758 -GACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCA 3172700 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||||||| || | || || || ||||| ||||| | | || | || || || || Sbjct 3172699 GCAGAGACTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCCGATTATAA 3172640 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||| ||||||||||| ||| | ||| |||| Sbjct 3172639 CATCCAAAAGGAGTCCACGCTCCACTTGGT 3172610 >seq415 Length=3446356 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAA-CGGAGGCTGG 107614 ||||| || |||||||| ||| | ||||| |||||||| ||| | || || | ||| | Sbjct 2240530 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATCACCCTTGAGGTCGAAAGCTCG 2240471 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| ||| | | || || |||||| ||||| || || | ||| |||||| Sbjct 2240470 -GATACGATCGACAATGTGAAGGCGAAGATTCAGGATAAGGAGGGAATCCCCCCGGATCA 2240412 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | || | ||| || || ||||| ||||||| || ||||||||||||| Sbjct 2240411 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGCACCTTGGCGGACTACAA 2240352 Query 107735 CATTCAAAAGGAG 107747 ||| ||||||||| Sbjct 2240351 CATCCAAAAGGAG 2240339 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || |||||||| ||| | || ||||| ||||| ||| | ||| ||| ||| | Sbjct 2241214 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATAACCCTTGAAGTTGAGAGCTCG 2241155 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| | | | | || || |||||| || || ||||| | ||| ||| || Sbjct 2241154 -GACACTATTGACAACGTTAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGACCA 2241096 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||| | ||| ||||| ||||| ||||| | | || | || |||||||| Sbjct 2241095 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAGGATGGCCGCACCCTCGCAGACTACAA 2241036 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||| || || || || || |||||| |||| Sbjct 2241035 CATCCAGAAAGAATCAACCTTGCACTTGGT 2241006 >seq255 Length=3424836 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| |||||| | || || || || || ||| | || ||| ||| Sbjct 2253879 ATGCAGATCTTTGTGAAAACTCTTACCGGAAAGACAATCACCCTTGAGGTGGAAAGCTC- 2253821 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| ||| | | || || ||||| ||||| ||||| | ||| | | || Sbjct 2253820 CGATACCATCGACAACGTCAAGGCTAAGATCCAGGATAAGGAAGGAATCCCCCCG-ACCA 2253762 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| |||||||| | || || ||||||||||| |||| | || | || |||||||| Sbjct 2253761 GCAAAGACTTATCTTCGCAGGAAAACAGCTGGAAGACGGCCGCACCCTCGCCGACTACAA 2253702 Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758 |||||| |||||||| || |||| Sbjct 2253701 CATTCAGAAGGAGTCAACCCTGCA 2253678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874281840902