Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 140 6e-28 seq255 136 8e-27 seq415 131 3e-25 seq3 131 3e-25 seq304 127 4e-24 seq413 104 5e-17 >seq1 Length=8502017 Score = 140 bits (154), Expect = 6e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || |||| | || || ||||| || || ||| ||||| || || || |||| Sbjct 7226158 TACCACCCCTCAGCCTGAGGACCAAGTGGAGGGTGCTTTCCTTCTGGATGTTGTAGTCAG 7226099 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||||| || || || ||||| |||||||| || || || || ||||| | Sbjct 7226098 CGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGGG 7226039 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG-GTTCT 82760 | ||||||||||||||||||||||| || || ||||| ||||| || || | || ||| Sbjct 7226038 GGATTCCTTCCTTATCTTGAATCTTAGCCTTGACATTATCAATGGTGTC-TGAGCTTTCA 7225980 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | || || |||||||| |||| || || ||||| ||||||||| Sbjct 7225979 ACCTCGAGGGTAATTGTCTTGCCCGTCAGGGTTTTCACAAAGATCTGCATT 7225929 Score = 132 bits (146), Expect = 9e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | || || || || |||||||| || ||||| |||| || | | || Sbjct 7225917 ACGGAGGACAAGATGAAGGGTGGACTCTTTCTGAATGTTATAGTCAGCGAGGGTGCGGCC 7225858 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || ||||| || |||||||| |||||||| |||||||| || ||||| ||||| Sbjct 7225857 GTCTTCGAGCTGTTTGCCGGCAAAGATCAGTCTTTGCTGATCTGGGGGAATTCCCTCCTT 7225798 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||| ||||| || || || || ||||| ||||| | || || || | || || Sbjct 7225797 ATCTTGGATCTTAGCCTTGACGTTATCAATGGTATCGGAACTCTCCACCTCAAGGGTGAT 7225738 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | || || || || |||||||| Sbjct 7225737 GGTCTTTCCGGTAAGGGTTTTCACGAAGATCTGCAT 7225702 Score = 109 bits (120), Expect = 1e-18 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || ||||| ||||| || || ||||||| || | || || Sbjct 7226828 CGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTCCTTCCA 7226769 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || ||||||||||| | || || ||||||||||| || || ||||| Sbjct 7226768 TCCTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATCCCCTCCTTG 7226709 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || || || || || || || || || || || || | || | || || |||| || || Sbjct 7226708 TCCTGGATTTTCGCCTTCACGTTGTCGATGGTGTC-TGAGCTCTCCACCTCCAGGGTGAT 7226650 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || || | ||||| || || ||||||||| Sbjct 7226649 GGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCATT 7226613 >seq255 Length=3424836 Score = 136 bits (150), Expect = 8e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| ||||| || || ||||| || |||||||| | || | | ||| Sbjct 2253209 ACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTATAATCCGCCAGGGTACGACC 2253268 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || || ||||||||||| || || || || || ||||| || ||||| ||||| Sbjct 2253269 ATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTT 2253328 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || || |||||||| || ||||| || || || || || | || || |||| ||| | Sbjct 2253329 GTCCTGGATCTTTGCCTTGACATTGTCGATGGTGTC-GGAGCTCTCGACCTCCAGAGTAA 2253387 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||||||||| | ||||| || || |||||||| Sbjct 2253388 TGGTCTTGCCTGTGAGGGTCTTCACGAAAATCTGCAT 2253424 Score = 118 bits (130), Expect = 2e-21 Identities = 163/227 (72%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| ||||| | ||||| || || || ||||| || || || || | Sbjct 2253654 CCACCACGCAGACGGAGAACAAGATGCAGGGTTGACTCCTTCTGAATGTTGTAGTCGGCG 2253713 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | |||||||| || |||||||| || ||||| |||||||| || || || || Sbjct 2253714 AGGGTGCGGCCGTCTTCCAGCTGTTTTCCTGCGAAGATAAGTCTTTGCTGGTCGGGGGG- 2253772 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||||||||| || ||||| || || || || || || ||||| ||| || Sbjct 2253773 ATTCCTTCCTTATCCTGGATCTTAGCCTTGACGTTGTCGATGGTATCGGAGCTTTCCACC 2253832 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || || | || || ||||| |||||||| Sbjct 2253833 TCAAGGGTGATTGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 2253879 Score = 109 bits (120), Expect = 1e-18 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || || || ||||| || |||||||| | | | | ||| Sbjct 2253437 ACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTATAATCCGCCAAGGTACGACC 2253496 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || || ||||||||||| || || || || || ||||| || ||||| ||||| Sbjct 2253497 ATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTT 2253556 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || || |||||||| || ||||| || || || || || | || || || | ||| | Sbjct 2253557 GTCCTGGATCTTTGCCTTGACATTGTCGATGGTGTC-GGAGCTCTCCACCTCGAGAGTGA 2253615 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || | || || || || |||||||| Sbjct 2253616 TGGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCAT 2253652 >seq415 Length=3446356 Score = 131 bits (144), Expect = 3e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| ||||||| || ||||||||||| || || || || | || | | ||| Sbjct 2241228 CGGAGAACCAAGTGCAAGGTCGATTCTTTCTGGATGTTGTAGTCGGCAAGGGTACGACCA 2241287 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || |||||||| || |||||||| || ||||| ||||||||||| || || ||||| Sbjct 2241288 TCCTCGAGTTGTTTGCCGGCAAAGATAAGCCTTTGCTGATCTGGAGGAATCCCCTCCTTG 2241347 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || ||||| || || || || | || || || | || || Sbjct 2241348 TCCTGGATCTTGGCCTTAACATTGTCGATAGTGTCGGAACTCTCCACCTCGAGGGTGATA 2241407 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||||| | || || || || |||||||| Sbjct 2241408 GTCTTGCCTGTGAGGGTTTTCACGAAAATCTGCAT 2241442 Score = 123 bits (136), Expect = 5e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||||| || ||||||||||| || || || || | || | | || Sbjct 2240999 ACGGAGGACCAAGTGCAAGGTTGATTCTTTCTGGATGTTGTAGTCTGCGAGGGTGCGGCC 2241058 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || || |||||||| || || || || || || || ||||||||||| Sbjct 2241059 ATCCTCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTT 2241118 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || |||||||| || || || || ||||| || || || | || ||||| | |||| Sbjct 2241119 GTCCTGAATCTTGGCCTTAACGTTGTCAATAGTGTC-CGAGCTCTCAACTTCAAGGGTTA 2241177 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || | ||||| ||||| |||||||| Sbjct 2241178 TGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 2241214 Score = 107 bits (118), Expect = 4e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | || || || || || ||||| || ||||| || | || | | || Sbjct 2240771 ACGGAGAACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCCGCAAGGGTGCGGCC 2240830 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || || || || || ||||| || ||||| || |||||||| || || || || Sbjct 2240831 GTCTTCAAGCTGCTTGCCGGCGAAGATGAGCCTTTGCTGGTCTGGAGGGATACCCTCTTT 2240890 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||| || || || || ||||| ||||| || || | || | || || || | ||| | Sbjct 2240891 GTCTTGGATTTTGGCCTTGACATTGTCAATGGTGTC-TGAGCTCTCAACCTCGAGAGTGA 2240949 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | || || || || | || || || |||||||||||| Sbjct 2240950 TGGTTTTCCCAGTGAGGGTTTTCACGAATATCTGCATT 2240987 >seq3 Length=5347415 Score = 131 bits (144), Expect = 3e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || ||||| || || || || || || || |||||||| | || | | || Sbjct 3172604 CGGAGGACCAAGTGGAGCGTGGACTCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCA 3172663 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || ||||| ||||| ||||| || || ||||| || |||||||||||| Sbjct 3172664 TCCTCAAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGGTCTGGGGGGATTCCTTCCTTA 3172723 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || || ||||| || || || || || || || ||| || | || ||||| | |||||| Sbjct 3172724 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCA-GAGCTCTCCACTTCAAGAGTTAT 3172782 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| ||||| |||||||| Sbjct 3172783 GGTCTTGCCAGTTAGAGTCTTGACAAAGATCTGCAT 3172818 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || ||||||| || ||||||||||| || || || || | || | | ||| Sbjct 3172832 CGGAGGACCAAGTGCAAGGTCGATTCTTTCTGGATGTTGTAGTCGGCAAGGGTACGACCA 3172891 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || ||||| || || ||||| || || ||||| ||||| || || ||||||||||| Sbjct 3172892 TCCTCGAGTTGCTTGCCGGCAAAAATCAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTG 3172951 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| ||||| ||||| ||||| || || | ||| || || | || || Sbjct 3172952 TCCTGGATCTTGGCTTTAACATTGTCAATGGTGTCGGAACTTTCCACCTCGAGGGTGATT 3173011 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| | || || || || |||||||| Sbjct 3173012 GTTTTTCCTGTGAGGGTTTTCACGAAGATCTGCAT 3173046 Score = 107 bits (118), Expect = 4e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| | || || ||||| ||||| || ||||| || || || |||| Sbjct 3172364 CCACCTCTCAGCCTTAGGACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCC 3172423 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | ||||| || || || ||||| |||||||| | || || || || || || Sbjct 3172424 AATGTGCGCCCGTCCTCCAGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 3172483 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || ||||||||||| ||||| || || || || || || || || || || | ||||| Sbjct 3172484 ATGCCTTCCTTATCCTGAATTTTAGCCTTCACGTTGTCGATGGTGTC-CGAGCTCTCTAC 3172542 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| | || || |||||||| || | ||||| ||||| |||||||| Sbjct 3172543 TTCGAGGGTAATGGTCTTGCCAGTTAGAGTCTTGACAAAGATCTGCAT 3172590 Score = 100 bits (110), Expect = 6e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || | ||| || || || || ||||| || || ||||||| Sbjct 3172136 CCCCCACGCAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCC 3172195 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || || ||||| || || || || || ||||| || || || || || || || Sbjct 3172196 AAAGTCCTGCCATCTTCCAGCTGCTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 3172255 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || || || || ||||||||||| || || || || || || || || | || || Sbjct 3172256 ATCCCCTCTTTGTCCTGAATCTTTGCCTTCACGTTGTCTATGGTGTC-CGAGCTCTCCAC 3172314 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || || || || || || | ||||| || || ||||||||| Sbjct 3172315 CTCCAAGGTGATTGTTTTCCCAGTGAGAGTCTTCACGAAGATCTGCATT 3172363 >seq304 Length=3547449 Score = 127 bits (140), Expect = 4e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | |||||| || ||||| ||||| || ||||| || | ||| | | || Sbjct 3199051 CGGAGGACCAGGTGCAGTGTGGATTCCTTCTGGATGTTATAGTCGGCGAGAGTGCGTCCA 3199110 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || ||||| || ||||| | | || ||||| ||||| || ||||||||| Sbjct 3199111 TCTTCGAGCTGCTTTCCGGCGAAGATCAACCGCTGCTGATCCGGAGGAATCCCTTCCTTA 3199170 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| || || ||||| || || || || | ||| || |||| ||| ||| Sbjct 3199171 TCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGATTCCACCTCCAGAGTAATC 3199230 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | || || || || |||||||| Sbjct 3199231 GTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 3199265 >seq413 Length=2569514 Score = 104 bits (114), Expect = 5e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| |||| | || ||| | ||| || |||||||||||||| || || ||||||| Sbjct 725176 CCTCCACTCAGCCTCAAAACAAGGTGGAGGGTAGATTCTTTCTGAATGTTGTAATCAGCC 725117 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || || ||||| | | || |||||||| ||||||||||| ||||| ||||| Sbjct 725116 AAAGTCCTGCCATCTTCCAACAGCTTGCCAGCAAATATTAGTCTTTGATGATCAGGAGGG 725057 Query 82704 ATTCCTTCCTTATCTTG 82720 || |||||||| || || Sbjct 725056 ATGCCTTCCTTCTCCTG 725040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981820683735602