Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq452 100 7e-16 seq403 95.1 3e-14 seq2 95.1 3e-14 seq414 91.5 3e-13 >seq452 Length=6822880 Score = 100 bits (110), Expect = 7e-16 Identities = 191/278 (69%), Gaps = 10/278 (4%) Strand=Plus/Plus Query 279818 AAAGAACTGATCCATTTTTCTAATTATGATGTTCATCGTTCTATTCCTCATTTAATGGAT 279877 || ||||| || | |||||| | | ||| |||| | || || || | | ||||| Sbjct 2381187 AAGGAACTCATTCTTTTTTCAATTGCAGATCTTCAGAGGTCGATCCCATCTATGGTGGAT 2381246 Query 279878 GGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTAAAG 279937 || ||||||||| || || ||||| | ||| | | || |||||||| || | ||| Sbjct 2381247 GGATTGAAACCTGGTCAACGGAAGATACTCTTCTGCTCATTTAAAAGAAATTTCATTAAG 2381306 Query 279938 GAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCACGGT 279997 ||| ||||| ||||| | |||||||| || || ||| ||| ||||||||| || Sbjct 2381307 GAAGCAAAAGTTGCACAGTTCTCTGGTTATGTGTCGGAGCATTCAGCTTATCATCATGGA 2381366 Query 279998 GA----AGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTAT-GGCTTCAA 280052 || ||| | || || |||| |||| | || ||||||||| | ||| ||| Sbjct 2381367 GAGCAAAGCTTGGCT----GGCACTATAATAGGCATGGCACAAGATTTTGTTGGCAGCAA 2381422 Query 280053 ACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGT 280090 |||| |||| || || | ||||||||||| |||||| Sbjct 2381423 -CAACATAAACCTTCTCTTGCCAAATGGTCAGTTTGGT 2381459 >seq403 Length=2629907 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 167202 AATATTTCAAAAGAGCACCTAAAATCTTTATTAATTATCATTACACCACCAGCATTATCG 167261 ||||||| ||| |||||| | ||| | || || |||| | | ||||||||||||| Sbjct 2249336 AATATTTGAAATGAGCACATTAAACTGTCATCAACACTCATCATAGCACCAGCATTATCA 2249277 Query 167262 AATTCATTCGCATAATTTGGTGCTGAAAATACAGTAACTAATTTACGATTGAAAAATAAT 167321 |||||| ||||||||| || |||||||||||||| | | | || ||| ||| Sbjct 2249276 AATTCACCACAATAATTTGGGGCAGAAAATACAGTAACGAGCTGCCTATCTGCAAAGAAT 2249217 Query 167322 TCATAACCATCTTCAACAAC 167341 |||||||||||||| ||||| Sbjct 2249216 TCATAACCATCTTCGACAAC 2249197 >seq2 Length=6193689 Score = 95.1 bits (104), Expect = 3e-14 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 279875 GATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTA 279934 ||||||||||||||| || || ||||| | ||| | | ||||||||||| || | Sbjct 618710 GATGGTTTGAAACCTGGTCAACGGAAGATACTCTTCTGCTCATTCAAAAGAAATTTCATC 618769 Query 279935 AAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCAC 279994 |||||| ||||| ||||| | |||||||| || || ||| | | ||||||||| Sbjct 618770 AAGGAAGCAAAAGTTGCACAGTTCTCTGGTTATGTGTCGGAGCATTCTGCTTATCATCAT 618829 Query 279995 GGTGA--AGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTT-ATGGCTTCA 280051 || || | |||| | | |||| |||| | || ||||||||| |||| | Sbjct 618830 GGAGAGCAAAGTCTAGCTA--GCACTATAATAGGCATGGCACAAGATTTTGTTGGCAGC- 618886 Query 280052 AACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGT 280090 |||||| ||||||| || ||||||||||| |||||| Sbjct 618887 AACAACATAAATCTTCTCATGCCAAATGGTCAGTTTGGT 618925 >seq414 Length=5667865 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 131867 GCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTT 131926 || ||||||||||| ||||| ||||| || || || ||||| ||||| || ||| | Sbjct 274867 GCCTTTGCTTGTGTCGAAGGCATATTTTTCTCCGGAAGCTTCTGCGCTATATTCTGGTTG 274926 Query 131927 AAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAA 131986 || || | || ||||||||||| | | || |||||| || |||| ||| | |||||| Sbjct 274927 AAAAAAAGGGGCTTGATGCCTGGTTTGACCTTCTCCAATGAACTCATTTCGCGTGATGAA 274986 Query 131987 GCATTGCATACTGAATTTGCTATATTAATCTATAG 132021 | | ||| ||| || ||| ||||||||||| Sbjct 274987 GGTCTCCATTGTGATTTCGCTTGCTTAATCTATAG 275021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186804923271798