Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq415 109 4e-19 seq3 107 1e-18 seq1 107 1e-18 seq304 102 5e-17 seq317 93.3 3e-14 seq482 84.2 1e-11 >seq415 Length=3446356 Score = 109 bits (120), Expect = 4e-19 Identities = 173/243 (71%), Gaps = 10/243 (4%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || |||||||||| || | || || || ||||||||||| ||||| ||| Sbjct 2240292 AAAATCTGCATTCCACCTCTCAGGCGGAGGACTAAGTGGAGAGTGCTCTCCTTTTGGATG 2240351 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || | | ||||| |||| || | || || |||||||| ||||| | |||| Sbjct 2240352 TTGTAGTCCGCCAAGGTGCGCCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGC 2240411 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 ||||| | || | || || || || ||| ||| ||| |||| ||| | || || Sbjct 2240412 TGATCCGGGGGGATTCCCTCCTTATCCTGAATCTTCGCCTTC-ACATTGTCGATCGTATC 2240470 Query 33690 ---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746 ||| ||| || |||| ||||| ||||| ||||| | || || ||||||||||| Sbjct 2240471 CGAGCT---TTCGACCTCAAGGGTGATGGTTTTCCCTGTGAGAGTCTTGACAAAGATCTG 2240527 Query 33747 CAT 33749 ||| Sbjct 2240528 CAT 2240530 >seq3 Length=5347415 Score = 107 bits (118), Expect = 1e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| | || ||||| || ||||||||||| || || |||||||| || | Sbjct 3172364 CCACCTCTCAGCCTTAGGACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCC 3172423 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | |||||| |||| |||| || ||||| ||||| ||||| | |||||| || | || Sbjct 3172424 AATGTGCGCCCGTCCTCCAGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGG 3172483 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCA 33700 | ||||| || || |||||| ||| || | ||| | |||||| | | | || | Sbjct 3172484 ATGCCTTCCTTATCCTGAATTTTAGCCTTC-ACGTTGTCGATGGTGTC-CGAGCTCTCTA 3172541 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || |||| || || ||||||||||||||| Sbjct 3172542 CTTCGAGGGTAATGGTCTTGCCAGTTAGAGTCTTGACAAAGATCTGCATA 3172591 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || |||||||| |||| || || || | || || | ||| || ||||||||| Sbjct 3172856 TCTTTCTGGATGTTGTAGTCGGCAAGGGTACGACCATCCTCGAGTTGCTTGCCGGCAAAA 3172915 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||| | |||||||| | || | ||||| ||||| || || | || ||||| Sbjct 3172916 ATCAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTT-GGCTTTAACATT 3172974 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||||||| |||||| || | ||||| ||||| ||||| | ||||| || Sbjct 3172975 GTCAATGGTGTCGGAACTTTCCACCTCGAGGGTGATTGTTTTTCCTGTGAGGGTTTTCAC 3173034 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 3173035 GAAGATCTGCAT 3173046 >seq1 Length=8502017 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| | ||| | ||| | ||| || || || ||||| |||||||| |||| | Sbjct 712082 CCGCCTCGGAGACGGAGCACAAGATGGAGCGTAGATTCCTTTTGAATGTTGTAGTCGGCG 712141 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| | || || | || || ||||| || ||||| ||||||||||| | || Sbjct 712142 AGCGTCCGTCCATCCTCAAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGATCGGGAGGG 712201 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||| || ||| || | ||| | ||||||| || ||||| Sbjct 712202 ATCCCTTCCTTGTCCTGAATCTTGGCCTTC-ACGTTGTCGATGGTGTCGGAAGACTCCAC 712260 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||| ||||| || || |||| ||||| || ||||||||||| Sbjct 712261 CTCCAGCGTAATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 712308 Score = 104 bits (114), Expect = 2e-17 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| |||| | | ||||| || || |||||||| || || |||||||| || | Sbjct 7226385 ACCACCCCTCAGCCTGAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 7226326 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || ||||||||||| || | |||||||| ||| | || Sbjct 7226325 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCCGCTGCTGGTCTGGGGG 7226266 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTC---GCTTGATTC 33698 | || |||||||| || ||| ||| | || | ||||| ||| ||| Sbjct 7226265 GATGCCCTCTTTGTCTTGGATCTTCGCTTTGACGTTATCGATAGTGTCCGAGCT---TTC 7226209 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| ||||| || ||||| || | || || ||||||||||||||| Sbjct 7226208 AACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCATA 7226157 Score = 98.7 bits (108), Expect = 7e-16 Identities = 171/244 (70%), Gaps = 10/244 (4%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| |||| | | ||||| || || |||||||| || || ||| Sbjct 7226624 AAAATCTGCATTCCACCCCTCAGCCTGAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATG 7226565 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | || ||||| |||| || | || || ||||| || ||||| | |||| Sbjct 7226564 TTGTAATCTGCCAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAATCTCTGC 7226505 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 |||||| | || | || || || || |||||| ||| || | ||| | |||||| Sbjct 7226504 TGATCTGGGGGGATGCCCTCCTTATCCTGGATTTTCGCCTTC-ACGTTGTCGATGGTGTC 7226446 Query 33690 ---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746 ||| || || || | ||||| ||||| || || | || || ||||||||||| Sbjct 7226445 TGAGCT---CTCGACCTCTAGAGTGATGGTTTTCCCGGTGAGGGTCTTCACAAAGATCTG 7226389 Query 33747 CATA 33750 |||| Sbjct 7226388 CATA 7226385 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| |||| | | ||||| || || ||||| || || || |||||||| || | Sbjct 7226157 ACCACCCCTCAGCCTGAGGACCAAGTGGAGGGTGCTTTCCTTCTGGATGTTGTAGTCAGC 7226098 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || ||||||||||| |||| | |||||| ||| | || Sbjct 7226097 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 7226038 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||||| || || ||| || | | |||| || | |||||| ||| || Sbjct 7226037 GATTCCTTCCTTATCTTGAATCTT-AGCCTTGACATTATCAATGGTGTCTGAGCT---TT 7225982 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || || || || || | ||||| |||||||||||||| Sbjct 7225981 CAACCTCGAGGGTAATTGTCTTGCCCGTCAGGGTTTTCACAAAGATCTGCAT 7225930 >seq304 Length=3547449 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| || || ||| || || || ||||| || |||| ||| |||||| | || || Sbjct 3199057 ACCAGGTGCAGTGTGGATTCCTTCTGGATGTTATAGTCGGCGAGAGTGCGTCCATCTTCG 3199116 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || |||||||| || ||||| ||||||||||| | || | ||||| || || | Sbjct 3199117 AGCTGCTTTCCGGCGAAGATCAACCGCTGCTGATCCGGAGGAATCCCTTCCTTATCCTGA 3199176 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || ||| |||| ||| | ||||||| |||||||| || | || ||||| || Sbjct 3199177 ATCTTGGCCTTC-ACATTGTCGATGGTGTCGGAGGATTCCACCTCCAGAGTAATCGTCTT 3199235 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||||||||| Sbjct 3199236 CCCCGTAAGGGTTTTCACGAAGATCTGCAT 3199265 >seq317 Length=1979591 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| || || || || || |||||||| |||| ||| ||||| | || || Sbjct 618305 ACCAGATGCAGCGTTGATTCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGCCCATCCTCA 618246 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || ||||| || ||||| || |||||||| | || | |||||| ||||| | Sbjct 618245 AGCTGCTTCCCGGCGAATATCAACCGTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGA 618186 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||| |||| | | ||| | |||||| || || || || | ||| ||||| || Sbjct 618185 ATCTTCGCCTTCA-CGTTGTCGATAGTGTCGGAGGACTCTACCTCTAGCGTAATCGTCTT 618127 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||||||||| Sbjct 618126 CCCCGTAAGGGTTTTCACGAAGATCTGCAT 618097 >seq482 Length=739299 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| || || || || || || |||||||| | || || ||| | || || Sbjct 127944 ACCAGATGCAGTGTAGATTCCTTCTGAATATTGTAATCAGCAAGAGTACGTCCATCTTCA 128003 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || ||||| || || || ||||||||||| | || | ||||| ||||| | Sbjct 128004 AGCTGCTTCCCGGCGAAGATTAACCGCTGCTGATCCGGAGGGATCCCTTCCTTGTCCTGA 128063 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || | | |||| ||| | |||||| || ||||| || | ||| ||||| || Sbjct 128064 ATCTT-GGCCTTGACATTGTCAATGGTGTCCGAGGACTCCACCTCCAGCGTAATCGTCTT 128122 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | || || |||||||||||||| Sbjct 128123 ACCCGTGAGGGTCTTCACAAAGATCTGCAT 128152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701924850560