Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq414 185 1e-40 >seq414 Length=5667865 Score = 185 bits (204), Expect = 1e-40 Identities = 366/526 (70%), Gaps = 18/526 (3%) Strand=Plus/Plus Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812 ||||||| || | |||| | || ||||| |||||| | |||| | || |||||||| Sbjct 3472914 TGTTCCCAATTCAGTACCCTCAAATCTGGGAGATGTACAAGAAAG-CAGAAGCCTCCTTC 3472972 Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCC-GA-CACGGTCCACTGGGTGTCGCTGAGCG 1455870 ||||| || ||||||||||| || | | | || | || || ||||| || |||| || Sbjct 3472973 TGGACGGCGGAGGAGGTCGATCT-GTCTCAAGATCTCGCTC-ACTGGTACTCTCTGA-CG 3473029 Query 1455871 AC-GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929 | ||||| ||||||||||| || | || || ||||||||||||| ||| || || Sbjct 3473030 TCTGACGAAAAGCATTTCATCAAACATATTCTAGC-TTTTTTCGCCGCCTCCGACGGGAT 3473088 Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989 |||| ||| || || || | | | || ||||| |||||||| | | ||||| || Sbjct 3473089 CGTGCTCGAAAATCTCGCTGCCAGGTTCATGAAGGAGGTCCAGGTTTCGGAGGCTCGCGC 3473148 Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049 ||||||||| |||||||| || || ||||||||||||||||| | || || || | Sbjct 3473149 GTTTTACGGCTTCCAGATTGCAATTGAAAACATCCACTCTGAGATGTATAGTCTTCTATT 3473208 Query 1456050 CGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGT 1456109 || || ||| ||||||| | | || ||| | ||||| || || || || || || Sbjct 3473209 GGAAACTTACATCAAGGATTCTGAAGAAAAGAGCAGGCTCTTCCGTGCTATTGAAACCGT 3473268 Query 1456110 GCCGTCGGTGAGGAAAAAGGCCGAC-TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCG 1456168 || | || ||| |||| |||| ||||| | |||||| || || | Sbjct 3473269 TCCTTGTGTCGAGAAGAAGG-CGACTTGGGCCCTTCGTTGGATC------GATGGTTCTG 3473321 Query 1456169 ACAC-TTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCA 1456226 | | || || ||| |||| | | |||||| |||| || || || ||||||||||| | Sbjct 3473322 AGTCGTTCGCAGAGAGGCTACTGGCTTTTGCCTGCGTGGAAGGTATATTTTTCTCGGGAA 3473381 Query 1456227 GTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 | ||||| || || || ||| | || ||| | || || |||||||| Sbjct 3473382 GCTTCTGTGCAATATTCTGGTTGAAAAAGAGGGGTCTGATGCCCGG 3473427 Score = 168 bits (186), Expect = 1e-35 Identities = 370/545 (68%), Gaps = 16/545 (3%) Strand=Plus/Plus Query 1455734 AACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAA 1455793 ||||| | ||||| | ||||||| || | |||| || ||||| |||||| || Sbjct 274417 AACCCTGATCGCTTCTGCATGTTCCCAATTCAGTACCCTGAAATCTGGGAGATGTAC-AA 274475 Query 1455794 AAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGA-CACGGTCC 1455852 ||||| ||||| ||||||||||| || || || || || | || | | ||| Sbjct 274476 GAAGGCAGAGGCTTCCTTTTGGACGGCGGAAGAAGTTGATTTATCACAAGATCTCCGTC- 274534 Query 1455853 ACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTC 1455912 ||||| || || | |||||| ||||||||||| || || || ||| || ||| Sbjct 274535 ACTGGAACTCCCTTACATCTGACGAGAAGCATTTCATCAAACATGTTCTAGCC-TTCTTC 274593 Query 1455913 GCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAA 1455972 || || |||||| ||||| |||||| ||||| | | | || ||||| |||||||| Sbjct 274594 GCGGCATCCGATGGAATCGTTCTCGAGAATCTGGCTGCCAGATTCATGAAGGAGGTCCAG 274653 Query 1455973 TTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAA 1456032 | | ||||| | |||||| || |||||||| || || ||||| || ||||| || Sbjct 274654 GTTTCGGAGGCCAGGGCGTTTTATGGTTTCCAGATTGCAATTGAAAATATTCACTCAGAG 274713 Query 1456033 ACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTT 1456092 | || || || | || || ||| ||||||| | | |||||| | | ||||| Sbjct 274714 ATGTATAGTCTACTTTTGGAAACATACATCAAGGATTCTGAAGAGAAGAGCAAGCTCTTC 274773 Query 1456093 CGCGCCATCGACACGGTGCCGTCGGTGAGGAAA--AAGGCCGACTGGGCGATGAAGTGGA 1456150 || || || || || || |||| ||| |||| ||||| | ||||| | |||| Sbjct 274774 CGTGCGATTGAAACCGTTCCGT--GTGTCGAAAAGAAGGCGAATTGGGCCCTTCGCTGGA 274831 Query 1456151 TCAACAAGGAGGGCCTCGACACTTTGCC-GAGCGGCTCGTCGGCTTTGC-CGCGTCGAGG 1456208 || ||||| || |||| || ||| |||| ||| |||||| | ||||| | Sbjct 274832 TC------GAGGGTTCTGAGTCTTTTCCAGAGAGGCTACTCGCCTTTGCTTGTGTCGAAG 274885 Query 1456209 GCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGC 1456268 |||| |||||||| || || |||||||| || || ||| | || || | ||| | |||| Sbjct 274886 GCATATTTTTCTCCGGAAGCTTCTGCGCTATATTCTGGTTGAAAAAAAGGGGCTTGATGC 274945 Query 1456269 CCGGT 1456273 | ||| Sbjct 274946 CTGGT 274950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177761237947916