Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq414 212 9e-50 seq507 116 5e-21 >seq414 Length=5667865 Score = 212 bits (234), Expect = 9e-50 Identities = 579/878 (66%), Gaps = 24/878 (3%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 ||||||||||||||||| || |||| || ||||| || || || | ||| ||| Sbjct 275300 TTTTGGTATTCACCAACTCGCCTCTCAAAGAAATTGGTCTTCCCCTGCAAACTTATGAGC 275241 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAA-AT 39444 ||||| ||||||| |||||| || || || || ||| | || || ||| | Sbjct 275240 TCCATCCAATCAAAAGGATTATGTGAGTTGTACAACTTCTTATACCCCAAGG-TGACCAG 275182 Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 |||| |||| || ||||| ||||||||| |||||| || | |||||||| | || Sbjct 275181 CAATTTATCCGCCACAAACTCTATGTATTGGCTCATCAACTCTGAGTTCATTCCCAGAAG 275122 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 | |||| || || | ||||||| |||| || | || || || | | | Sbjct 275121 CCTGCAAGGTAACGCATCACAAACAAACTCTCTTTCAATATTCACTGCATCCGCCACAAG 275062 Query 39565 CG-ATGTTACTACCTCATCACTCGGTG------GATGCAATAAATGTTTAAACATTAAGC 39617 | ||| || || ||||| || || ||| | || | ||||||| Sbjct 275061 CCCATGCACCTTT-TCTTCACTAAGTTTCCCTCGAAGCA------GACTATAGATTAAGC 275009 Query 39618 AGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTC 39677 | ||||| |||||||| || || ||||| | ||| | ||| || || || || | | Sbjct 275008 AAGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAAC 274949 Query 39678 CAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAAGAAG 39736 ||||||| | || | ||||| | ||| ||||| || ||| ||| | || || || || Sbjct 274948 CAGGCATCAAGCCCCTTTTTTTCAACCAGAATATAGC-GCAGAAGCTTCCGGAGAAAAAT 274890 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA---TGT 39793 |||||||| || ||||| || | || |||||| || | ||| | | Sbjct 274889 ATGCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAA---GACTCAGAACCCTCG 274833 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 ||||| | ||||||| || ||||| | ||||| || | ||||| || ||| Sbjct 274832 ATCCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGG 274773 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 ||||| | || || ||| ||| || | ||||| || | | ||||||||||| Sbjct 274772 AAGAGCTTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTATACATC 274713 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 ||||| || || |||||||| || ||||| || || ||||| || || || | || Sbjct 274712 TCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACC 274653 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || ||||| ||||| | |||| ||| || || |||||||| || || Sbjct 274652 TGGACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCG 274593 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCA 40093 || || || | |||||||| || |||| || || || | ||| | ||||||| | Sbjct 274592 AAGAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGTGA 274533 Query 40094 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTG 40153 || ||||| ||||| ||| |||||||| || |||||||| || ||||||||||| ||| Sbjct 274532 CGGAGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTG 274473 Query 40154 TACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191 ||||| | ||| || ||| | || || ||||| || || Sbjct 274472 TACATCTCCCAGATTTCAGGGTACTGAATTGGGAACAT 274435 Score = 192 bits (212), Expect = 8e-44 Identities = 416/617 (67%), Gaps = 4/617 (1%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| |||||||||||||||| |||||||| | ||| | || || || || || Sbjct 3473490 AAGCAAGCGAAGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTC 3473431 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAA 39732 | || ||||| ||||| | |||||| | ||| ||||| ||| || ||| | || || || Sbjct 3473430 AACCCGGGCATCAGACCCCTCTTTTTCAACCAGAATATTGCA-CAGAAGCTTCCCGAGAA 3473372 Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGT-ATCATTAT 39791 || || ||||| || ||||| || | || |||||| || ||| | | | || Sbjct 3473371 AAATATACCTTCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCG-AACGACTCAGAACCAT 3473313 Query 39792 GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | |||||| || ||||||| |||||||| | ||||| |||||| Sbjct 3473312 CGATCCAACGAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCAC 3473253 Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||||| ||||| ||| ||| || | || || || | || |||||||||| Sbjct 3473252 GGAAGAGCCTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACA 3473193 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || || |||||||||||||| || ||||| || |||||||| | || || | || Sbjct 3473192 TCTCAGAGTGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAA 3473133 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 || ||||| || || | || | |||||| ||| || || || |||| Sbjct 3473132 CCTGGACCTCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGG 3473073 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGT 40091 | ||||| || | | |||||| || |||| ||||| || | |||| | ||||| Sbjct 3473072 CGAAAAAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGT 3473013 Query 40092 CATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTT 40151 | || ||||| || | ||| || || || || ||||| || || || ||||| || | Sbjct 3473012 GAGCGAGATCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCT 3472953 Query 40152 TGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTT 40211 ||||||| | ||| || | | | || || ||||| || || || | || || ||| Sbjct 3472952 TGTACATCTCCCAGATTTGAGGGTACTGAATTGGGAACATGCAGAAGCGATCTGCGTTTG 3472893 Query 40212 TTGCAAGGATGGGTTCC 40228 ||||||| ||||||| Sbjct 3472892 GGGCAAGGAGGGGTTCC 3472876 >seq507 Length=3453940 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 ||||| ||||| || | ||| ||||| || || || ||||||| | ||| | ||||| | Sbjct 789709 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 789768 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 ||||| | || ||| ||||| ||||| || || || || | ||| || | ||||| | Sbjct 789769 TATGTATGAACAGCGGATTCAATATCATCCTTGTGGATGCCAACCGCAACCCTCATCAGC 789828 Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170 ||||| ||||||| ||| || | || || || | ||||| || ||||||||| Sbjct 789829 ATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAGA 789888 Query 70171 GTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || || || ||||| |||| || ||| ||||| ||||| || || Sbjct 789889 GTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 789935 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 ||||| ||||| || | ||| ||||| || || || ||||||| | ||| | ||||| | Sbjct 791906 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 791847 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 ||||| | || ||| ||||| ||||| || || || || | ||| || | ||||| | Sbjct 791846 TATGTATGAACAGCGGATTCAATATCATCCTTGTGGATGCCAACCGCAACCCTCATCAGC 791787 Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170 ||||| ||||||| ||| || | || || || | ||||| || ||||||||| Sbjct 791786 ATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAGA 791727 Query 70171 GTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || || || ||||| |||| || ||| ||||| ||||| || || Sbjct 791726 GTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 791680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904352265520