Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq414 172 4e-38 >seq414 Length=5667865 Score = 172 bits (190), Expect = 4e-38 Identities = 396/585 (68%), Gaps = 16/585 (3%) Strand=Plus/Plus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||| |||||||| || | ||| || ||| | |||||||| || ||| |||| || |||| Sbjct 274436 TGTTCCCAATTCAGTACCCTGAAATCTGGGAGATGTACAAGAAGGCAGAGGCTTCCTTTT 274495 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCAC 43826 |||| || |||||||||||||| | |||| | || |||| | | | | | Sbjct 274496 GGACGGCGGAAGAAGTTGATTTATCACAAGATCTCCGTCACTGGAACTCCCTTACATCTG 274555 Query 43827 AAGAAAAACATTTTAT--ATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGT 43884 | || || ||||| || | | | ||| | || || || || || ||| || || || Sbjct 274556 ACGAGAAGCATTTCATCAAACAT--GTTCTAGCCTTCTTCGCGGCATCCGATGGAATCGT 274613 Query 43885 CAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944 || ||| ||| | | || | | || || || | | || || | || Sbjct 274614 TCTCGAGAATCTGGCTGCCAGATTCATGAAGGAGGTCCAGGTTTCGGAGGCCAGGGCGTT 274673 Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004 |||||| || || ||||| || ||||||||||| || || ||||| ||||| || | || Sbjct 274674 TTATGGTTTCCAGATTGCAATTGAAAATATTCACTCAGAGATGTATAGTCTACTTTTGGA 274733 Query 44005 TACGTACATCAAAGATGGGCACGAGAAGCATCGAT-TGTTTAATGCGATAGAAACAGTAC 44063 || |||||||| ||| | |||||| | | | | || |||||| ||||| || | Sbjct 274734 AACATACATCAAGGATTCTGAAGAGAAG-AGCAAGCTCTTCCGTGCGATTGAAACCGTTC 274792 Query 44064 C-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAA---TTCAAATGATTCT 44119 | || | ||| | || || | ||||||||| ||||| | ||| ||| ||| Sbjct 274793 CGTGTGTCGAAA-AGAAGGCGAATTGGGCCCTTCGCTGGATCGAGGGTTC---TGAGTCT 274848 Query 44120 TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTT- 44178 ||| ||| | || |||| ||||| ||| |||||||| || || || ||| || Sbjct 274849 TTTCCAGAGAGGCTACTCGCCTTTGCTTGTGTCGAAGGCATATTTTTCTCCGGAAGCTTC 274908 Query 44179 TGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGA 44238 |||| | ||||| ||||| || ||| | || ||||||||||| ||||| || || ||||| Sbjct 274909 TGCG-CTATATTCTGGTTGAAAAAAAGGGGCTTGATGCCTGGTTTGACCTTCTCCAATGA 274967 Query 44239 GTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 | || ||||||||||| | ||||| ||||| |||||||| Sbjct 274968 ACTCATTTCGCGTGATGAAGGTCTCCATTGTGATTTCGCTTGCTT 275012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453490810590