Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 seq304 91.5 1e-13 >seq1 Length=8502017 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || |||||||| | | |||| |||| |||||||| || ||||| | Sbjct 7226348 TCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAG 7226289 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||| ||||| || || || || | |||||||| || |||||| ||| | | | Sbjct 7226288 ATGAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTCGCTTTGACGTTA 7226229 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | |||||| | | |||||| || || || || | || ||||| || || |||||| Sbjct 7226228 TCGATAGTGTCCGAGCTTTCAACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTCACA 7226169 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 7226168 AAGATCTGCATA 7226157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||| || || | ||||| |||| |||||||| || |||||| | Sbjct 7226576 TCCTTCTGGATGTTGTAATCTGCCAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAG 7226517 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || | | ||| ||||| || || | ||||| ||||| ||| || |||| | | Sbjct 7226516 ATCAATCTCTGCTGATCTGGGGGGATGCCCTCCTTATCCTGGATTTTCGCCTTCACGTTG 7226457 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||||| | || || |||||||| || | ||| || || || || |||||| Sbjct 7226456 TCGATGGTGTCTGAGCTCTCGACCTCTAGAGTGATGGTTTTCCCGGTGAGGGTCTTCACA 7226397 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 7226396 AAGATCTGCATA 7226385 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || |||||||| | | |||| |||| |||||||| || ||||| | Sbjct 7226120 TCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAG 7226061 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || | ||| || || || || | || || ||||| ||||| || | | Sbjct 7226060 ATCAGCCTCTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGAATCTTAGCCTTGACATTA 7226001 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||||| | |||||| || || || || | ||||||||||| ||||||||| Sbjct 7226000 TCAATGGTGTCTGAGCTTTCAACCTCGAGGGTAATTGTCTTGCCCGTCAGGGTTTTCACA 7225941 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 7225940 AAGATCTGCAT 7225930 >seq304 Length=3547449 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | || | |||| || | || || || || || || || |||||| Sbjct 3199038 GCCACCGCGTAGGCGGAGGACCAGGTGCAGTGTGGATTCCTTCTGGATGTTATAGTCGGC 3199097 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | ||||||||||| || |||||| | || | ||||| |||||||| || Sbjct 3199098 GAGAGTGCGTCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCGCTGCTGATCCGGAGG 3199157 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || ||||| |||||| |||| | || | ||||| | || ||| || Sbjct 3199158 AATCCCTTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGATTCCAC 3199217 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | || ||||| || |||||||| ||||| ||||| Sbjct 3199218 CTCCAGAGTAATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 3199265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931717336016