Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq414 132 6e-26 seq412 96.9 4e-15 >seq414 Length=5667865 Score = 132 bits (146), Expect = 6e-26 Identities = 223/321 (69%), Gaps = 14/321 (4%) Strand=Plus/Plus Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599 || |||||||| || || | || ||||| || || || |||| ||||||||| | Sbjct 2159310 AATCCATCCATTTCAGTTAATAGCTGATTGATAGTCTGCTCTCGTTCATCATTTCCACC- 2159368 Query 11600 ATACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656 |||| ||||| | |||||| | ||||| |||||||| |||||||| |||||||| Sbjct 2159369 --ACCAAGCCCAGCTCCTCGTTGCCTTCCCACAGCATCAATTTCATCAATAAAGACAATG 2159426 Query 11657 CATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCAC 11712 || || ||| || ||| | ||||| | ||| | || ||| ||| || || Sbjct 2159427 CAAGGGGCCTTGGACTT----GGCTTTCTCAAACAAATCCCTTACTCTTGAGGCTCCAAC 2159482 Query 11713 ACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTC 11772 ||| ||||||| ||||||||| | || || | ||| || ||||| ||| || ||| Sbjct 2159483 ACCCACAAACAGCTCCACAAATTCTGAAGCTGCGCAGGAGAAAAATGGAACACCTGCTTC 2159542 Query 11773 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGC 11832 || || | || | ||| || |||||||||||||| ||||| ||| | | ||| Sbjct 2159543 TCCGGCCACTGCCCTGGCCAGAAGGGTCTTTCCCGTTCCTGGTGGACCGACCAAAAGACA 2159602 Query 11833 GCCTCGGGGGATCTTGGCACC 11853 |||| |||||| || ||||| Sbjct 2159603 GCCTTTGGGGATTTTTGCACC 2159623 Score = 116 bits (128), Expect = 5e-21 Identities = 395/606 (65%), Gaps = 17/606 (3%) Strand=Plus/Minus Query 122671 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCC 122730 |||||||| ||||| || ||||| |||||||| |||||| | ||| ||||| | ||| Sbjct 274994 TGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAGGCATCAAGCCC 274935 Query 122731 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 122790 | || |||||||| | ||||||||||| |||||||| || || || || ||||| Sbjct 274934 CTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAGAAAAATATGCCTTCGACACAA 274875 Query 122791 GCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGCC 122850 ||||| || | || | || | || || ||| | || | ||| | ||| Sbjct 274874 GCAAAGGCGAGTAGCCTCTCTGGAAAAGACTCAGA---ACCCTCGATCCAGCGAAGGGCC 274818 Query 122851 CATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACT---GCTTC 122907 || ||||||||||| || | ||| || || |||| || || || | || |||| Sbjct 274817 CAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAGAGCTTGCTCTTC 274758 Query 122908 TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGA--ATATGTTTCGCCATGAA 122965 | |||||| |||||| |||||| | || | || | || ||| | || |||| Sbjct 274757 TCTTCAGA---ATCCTTGATGTATGTTTCCA--AAAGTAGACTATACATCTCTGAGTGAA 274703 Query 122966 CCATTTCATTATGGCAT-TGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCA 123024 ||||| | || || || | | || || | | || || | ||| ||||| Sbjct 274702 TATTTTCAAT-TGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACCTGGACCTCC 274644 Query 123025 TCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCC 123084 | | || || | | |||||| | ||| ||||||||||| | || ||||| || Sbjct 274643 TTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCGAAGAAGGCT 274584 Query 123085 AGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGGGTCTTCCAGTCGTCAAGATCT 123144 || | | || ||||| | ||| || | | |||| ||||||| |||||| Sbjct 274583 AGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGTGACGGAGATCT 274524 Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCAATTGCTCATTTGAGCCTTTTTATAGAGTTCC 123204 | || ||||||||||||||||| |||||| | | ||||| || || | ||| Sbjct 274523 TGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTGTACATCTCC 274464 Query 123205 CAGAGTTGTGGATACTTCAGGGGGAAGACTGTAAATCTGTTTAGGG-TGGGGGCCAGAAT 123263 |||| || || |||| | ||||| | || | | | | |||| ||||||| |||| Sbjct 274463 CAGATTTCAGGGTACTGAATTGGGAACA-TGCAGAAGCGATCAGGGTTGGGGGCAAGAAG 274405 Query 123264 AGGTTC 123269 ||||| Sbjct 274404 CGGTTC 274399 Score = 105 bits (116), Expect = 8e-18 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 ||||||||| |||||||| || ||||| |||||| | || ||||| ||||||| ||| Sbjct 3473467 ACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGCATCAGACCCCTCTT 3473408 Query 122736 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 |||||||| | || || ||||| || ||||| || ||||| ||||| || ||||| Sbjct 3473407 TTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAATATACCTTCCACGCAGGCAAA 3473348 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGCCCATTT 122855 || | || | || ||||| || ||| |||| | ||| | ||||| | Sbjct 3473347 AGCCAGTAGCCTCTCTGCGAACGACTCAGAAC---CATCGATCCAACGAAGGGCCCAAGT 3473291 Query 122856 CGCCTTCTTCTCAATACATGGTACAGTTT 122884 |||||||||||| | ||| || || |||| Sbjct 3473290 CGCCTTCTTCTCGACACAAGGAACGGTTT 3473262 >seq412 Length=943016 Score = 96.9 bits (106), Expect = 4e-15 Identities = 294/449 (65%), Gaps = 4/449 (1%) Strand=Plus/Minus Query 11452 ATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGC 11511 |||||| | || || | ||||| || ||| |||||||| | ||||| || || || Sbjct 350336 ATCAAACCTTCCAGGCCTCAGGAGTGCAGAATCCAGGATATCTGCACGATTGGTTGCAGC 350277 Query 11512 AATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAAT 11571 ||| || | ||||| || | || |||||||||||||| || || | ||| || | Sbjct 350276 AATGACGATGATGCCGGTGTTCCCTTCGAAGCCATCCATCTCAGTTAGGAGTTGGTTCAG 350217 Query 11572 TGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCCACCGC 11631 || ||||| || ||||| || | | ||||| | | ||| ||||| || Sbjct 350216 AGTCTGTTCCCTTTCATCGTTCCCCCCTCCAATACCAGTTCCCCTTTGACGACCCACAGC 350157 Query 11632 ATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATC 11691 |||||| || || | ||||| || || || ||||| || | | || ||||| Sbjct 350156 ATCAATTTCGTCCACAAAGACGATGCAGGGGGCGTTTTCCTTTGCCTTCTTGAAAAGATC 350097 Query 11692 GCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG 11751 || || || ||||| || || |||||||| || ||||| | | ||||| | || Sbjct 350096 ACGGACTCTGGAAGCACCAACTCCCACAAACATTTCGACAAACTCGGAACCAGAG-ATTG 350038 Query 11752 -GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTAC 11810 || |||||| || | ||| || || ||||| || | | ||||||||| || | Sbjct 350037 AGAAGAATGGCACCCCAGCTTCGCCAGCAATGGCCTTAGCCAACAAGGTCTTTCCAGTGC 349978 Query 11811 CTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC-ACTTCCAAAATATCTC 11869 |||| ||| | |||||| ||||| || || ||||| || | || | ||| Sbjct 349977 CTGGTGGACCAACAAGAAGGACGCCTTTCGGAATGCGAGCACCGACCGCTGTAA-ACCTC 349919 Query 11870 TCGGGTTGCTTGAGAAAATCCACAATCTC 11898 || |||| ||| || || ||||| | ||| Sbjct 349918 TCTGGTTTCTTTAGGAACTCCACCACCTC 349890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027933492800