Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq414 129 7e-25 seq412 87.8 2e-12 >seq414 Length=5667865 Score = 129 bits (142), Expect = 7e-25 Identities = 562/876 (64%), Gaps = 31/876 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||| |||||||||| ||||||||||| | |||||| || ||||| Sbjct 3473772 TACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGTTCCATC 3473713 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 | || || ||||||| || || | | | || | || ||||| | | | Sbjct 3473712 CAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGTACCCCAATGCAACCAACAAT-CT 3473654 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||||| ||| |||| ||||| | ||||| ||| || ||||| || | || | || Sbjct 3473653 ATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGCCTGCA 3473594 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || | ||| || | | ||| || | ||||| ||||| || ||| ||||| |||| Sbjct 3473593 CGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGAGCCCGTG 3473534 Query 129967 AATGGTCTCCGTGCCAGGTCTA---TTGCGCAAAGTCTTGAAGAGTTCCACG---GCAAA 130020 | || || | | | | || ||| | | | |||| || | || || Sbjct 3473533 CACCGTTTCTTCACTAAGCTTCACTTTAAGCAGACTAT---AGAG---CAAGCAAGCGAA 3473480 Query 130021 CTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 130080 || || | |||||| || ||||| ||||| ||||| |||||| || || ||||| Sbjct 3473479 GTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGCAT 3473420 Query 130081 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140 ||||||| ||| ||||||||||| || ||||| || || ||||| || || || || Sbjct 3473419 CAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAATATACCTTC 3473360 Query 130141 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA-GCGGGACTTTGTATCAAACCACT 130199 ||| || || || || | || | ||| || || || | | || | ||| ||| | Sbjct 3473359 CACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAACGACTCAGAACCATCGATCCAACGA-- 3473302 Query 130200 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTT 130259 | ||||| |||||| ||||||| ||| || ||||| | || || ||||| Sbjct 3473301 --AGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGAG-- 3473246 Query 130260 CCT--TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 130317 ||| |||||||| | ||| |||||||| | || | || ||| | || Sbjct 3473245 CCTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCAGA 3473186 Query 130318 ATGGACCATTTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 130375 |||| ||||| || ||| ||| | |||| || | ||| || || | ||| Sbjct 3473185 GTGGATGTTTTCA--ATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGG 3473128 Query 130376 ACCTCATCTGCA--AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 130433 ||||| || || || || | || ||| || | || || || ||||| | || | Sbjct 3473127 ACCTC--CTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGA 3473070 Query 130434 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGT 130493 |||| || || |||| || ||||| | || ||| | |||| | | ||||| Sbjct 3473069 AAAAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAG 3473010 Query 130494 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTAT 130553 | ||||| | || ||||| ||||||||||| ||||| | || || ||||| | Sbjct 3473009 CGAGATCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGT 3472950 Query 130554 AGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAACA 130589 | | ||||||| || || |||| | ||||||| Sbjct 3472949 ACATCTCCCAGATTTGAGGGTACTGAATTGGGAACA 3472914 Score = 105 bits (116), Expect = 8e-18 Identities = 181/261 (69%), Gaps = 5/261 (2%) Strand=Plus/Minus Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 |||||||| || ||||| || ||||||||||| |||||| || ||| ||||| | ||| Sbjct 274994 TGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAGGCATCAAGCCC 274935 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 | || ||||||||||| || || || || || ||||| || || || || ||||| Sbjct 274934 CTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAGAAAAATATGCCTTCGACACAA 274875 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGA-GCGGGACTTTGTATCAAACCACTTCATCGC 130206 || || || | || | ||| | ||| || | | || | ||| | | | | || Sbjct 274874 GCAAAGGCGAGTAGCCTCTCTGGAAAAGACTCAGAACCCTCGATCCAGCGA----AGGGC 274819 Query 130207 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 130266 ||| | |||||| || |||| |||||| ||||| | ||||| ||||| | |||| Sbjct 274818 CCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAGAGCTTGCTCTT 274759 Query 130267 TTCTGATGGATCTTTGATGTA 130287 ||| | ||| |||||||| Sbjct 274758 CTCTTCAGAATCCTTGATGTA 274738 Score = 98.7 bits (108), Expect = 1e-15 Identities = 192/280 (69%), Gaps = 8/280 (3%) Strand=Plus/Plus Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGC 14212 || |||||||| ||||| || || |||||||| || || || ||||||||||| || Sbjct 2159310 AATCCATCCATTTCAGTTAATAGCTGATTGATAGTCTGCTCTCGTTCATCATTTCCA--- 2159366 Query 14213 ATACCA---CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 14269 |||| || || | |||||| | || || || ||||||||||| || || || || Sbjct 2159367 CCACCAAGCCCAGCTCCTCGTTGCCTTCCCACAGCATCAATTTCATCAATAAAGACAATG 2159426 Query 14270 CATGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328 || || | || || ||| ||||| | ||| | ||||| ||| || ||||| Sbjct 2159427 CAAGG-GGCCTTGGACTTGGCTTTCTCAAACAAATCCCTTACTCTTGAGGCTCCAACACC 2159485 Query 14329 CACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCACC 14388 |||||||| ||||||||| | | || | || || || || || | ||| || Sbjct 2159486 CACAAACAGCTCCACAAATTCTGAAGCTGCGCAGGAGAAAAATGGAACACCTGCTTCTCC 2159545 Query 14389 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 14428 || | || | ||| || |||||||| ||||| |||||| Sbjct 2159546 GGCCACTGCCCTGGCCAGAAGGGTCTTTCCCGTTCCTGGT 2159585 >seq412 Length=943016 Score = 87.8 bits (96), Expect = 2e-12 Identities = 242/366 (66%), Gaps = 4/366 (1%) Strand=Plus/Minus Query 14065 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 14124 |||||| | || || | ||||| || || |||||||| || || || || || Sbjct 350336 ATCAAACCTTCCAGGCCTCAGGAGTGCAGAATCCAGGATATCTGCACGATTGGTTGCAGC 350277 Query 14125 GATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 14184 ||||| | |||||| || | || ||||||||||||||||| | |||||| || | Sbjct 350276 AATGACGATGATGCCGGTGTTCCCTTCGAAGCCATCCATCTCAGTTAGGAGTTGGTTCAG 350217 Query 14185 GGTTTGTTCGCGTTCATCATTCGCAGGCATACCACCCGCACTGCGTTGCTTACCGACGGC 14244 || ||||| | |||||| ||| | | ||| | | | ||| ||| || || Sbjct 350216 AGTCTGTTCCCTTTCATCGTTCCCCCCTCCAATACCAGTTCCCCTTTGACGACCCACAGC 350157 Query 14245 GTCAATTTCATCGATGAAAACGATACA-TGGTTGATTTTCACGGGCAACTTCAAAGATAT 14303 |||||||| || | || ||||| || || | ||| | | | ||| ||| | || Sbjct 350156 ATCAATTTCGTCCACAAAGACGATGCAGGGGGCGTTTTCCTTTGCCTTCTTGAAA-AGAT 350098 Query 14304 CTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATT 14363 | || ||||| ||||| || ||||||||||| || ||||| | || | | | ||| Sbjct 350097 CACGGACTCTGGAAGCACCAACTCCCACAAACATTTCGACAAACTCGGAACCAG-AGATT 350039 Query 14364 G-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTC 14422 | || ||| || || || ||| || || ||||| || | | |||||| || || Sbjct 350038 GAGAAGAATGGCACCCCAGCTTCGCCAGCAATGGCCTTAGCCAACAAGGTCTTTCCAGTG 349979 Query 14423 CCTGGT 14428 |||||| Sbjct 349978 CCTGGT 349973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431195632080