Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq452 104 1e-17 seq2 100 1e-16 >seq452 Length=6822880 Score = 104 bits (114), Expect = 1e-17 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 65089 TGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTG 65148 ||| ||||||||||||||||||| | | || || ||||| |||| ||||| || Sbjct 2381462 TGTACCAAACTGACCATTTGGCAAGAGAAGGTTTATGTTGTTGCTGCCAACAAAATCTTG 2381403 Query 65149 AGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTC 65208 ||||| || || || | || || || || || |||||||| ||||||| || Sbjct 2381402 TGCCATGCCTATTATAGTGCCAGCCAAGCTTTGCTCTCCATGATGATAAGCTGAATGCTC 2381343 Query 65209 AGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATG- 65267 || ||||| ||| || || ||||||||| |||| | | ||||| ||||||||| Sbjct 2381342 CGACACATAACCAGAGAACTGTGCAACTTTTGCTTCCTTAATGAAATTTCTTTTAAATGA 2381283 Query 65268 -CAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATCCA 65309 ||||| | ||| |||||| || | |||||||||||||| Sbjct 2381282 GCAGAAGAG--TATCTTCCGTTGACCAGGTTTCAATCCATCCA 2381242 >seq2 Length=6193689 Score = 100 bits (110), Expect = 1e-16 Identities = 160/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 65086 TCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATT 65145 || ||| |||||||||||||||||||| | | ||| || ||||| |||| ||||| Sbjct 618931 TCTTGTACCAAACTGACCATTTGGCATGAGAAGATTTATGTTGTTGCTGCCAACAAAATC 618872 Query 65146 CTGAGCCATTCCGATAATTGCTGC-ATTTAAACTCGCTTCACCGTGATGATATCCTGAAT 65204 || ||||| || || || | ||| | || ||| || || |||||||| | |||| Sbjct 618871 TTGTGCCATGCCTATTATAG-TGCTAGCTAGACTTTGCTCTCCATGATGATAAGCAGAAT 618813 Query 65205 GTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAA 65264 | || || ||||| ||| || || ||||||||| |||| | | ||||| |||| | Sbjct 618812 GCTCCGACACATAACCAGAGAACTGTGCAACTTTTGCTTCCTTGATGAAATTTCTTTTGA 618753 Query 65265 AT--GCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATC 65307 || ||||| | | ||| |||||| || | |||||| ||||| Sbjct 618752 ATGAGCAGA--AGAGTATCTTCCGTTGACCAGGTTTCAAACCATC 618710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235678512122700