Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq414 111 2e-19 >seq414 Length=5667865 Score = 111 bits (122), Expect = 2e-19 Identities = 296/440 (67%), Gaps = 12/440 (3%) Strand=Plus/Plus Query 59679 GACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTG 59738 ||||| ||||||||||||| | || || || ||||| || || || || ||| Sbjct 3473033 GACGAAAAGCATTTCATCAAACATATTCTAGCTTTTTTCGCCGCCTCCGACGGGATCGTG 3473092 Query 59739 ATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTC 59798 | |||||| | | | || ||||| |||||| || | ||||| || |||| Sbjct 3473093 CTCGAAAATCTCGCTGCCAGGTTCATGAAGGAGGTCCAGGTTTCGGAGGCTCGCGCGTTT 3473152 Query 59799 TACGCGTATCAGTCGTTCAAC-GAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGA 59857 |||| | ||| | ||| || |||||||| |||| ||| || | | || Sbjct 3473153 TACGGCTTCCAGAT-TGCAATTGAAAACATCCACTCTGAGATGTATAGTCTTCTATTGGA 3473211 Query 59858 TAAGTTGGTCAAGGATCCGGAAGAGAAG-GCTGGTCTGTTCCGTGCCATAGAGAC-GTCC 59915 | | |||||||| | ||||| ||| || || || |||||||| || || || || | Sbjct 3473212 AACTTACATCAAGGATTCTGAAGAAAAGAGCAGG-CTCTTCCGTGCTATTGAAACCGTTC 3473270 Query 59916 CCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGAT-GA--GTCCTGGAGCATCA 59972 | | || | | || || |||||| | | ||||| || || ||| || || Sbjct 3473271 CTTGT-GTCGAGAAGAAGGCGACTTGGGCCCTTCGTTGGATCGATGGTTCTG-AG--TCG 3473326 Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || ||| | | || | |||||||| ||||||||||| || || ||||| || ||| Sbjct 3473327 TTCGCAGAGAGGCTACTGGCTTTTGCCTGCGTGGAAGGTATATTTTTCTCGGGAAGCTTC 3473386 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 ||||| || |||||| | |||||| | || || ||||| || ||| |||||||| ||| Sbjct 3473387 TGTGCAATATTCTGGTTGAAAAAGAGGGGTCTGATGCCCGGGTTGACCTTCTCCAATGAG 3473446 Query 60093 CTGATTTCCCGGGACGAGGG 60112 || ||||||||||| ||||| Sbjct 3473447 CTCATTTCCCGGGATGAGGG 3473466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521248301920