Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq255 123 2e-23 seq415 109 5e-19 seq1 109 5e-19 seq3 100 2e-16 seq317 93.3 4e-14 >seq255 Length=3424836 Score = 123 bits (136), Expect = 2e-23 Identities = 166/230 (72%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| ||||| ||| | || || ||||| |||||| ||| Sbjct 2253879 ATGCAGATCTTTGTGAAAACTCTTACCGGAAAGACAATCACCCTTGAGGTGGAAAGCTCC 2253820 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || || || ||||| || || ||||| || Sbjct 2253819 GATACCATCGACAACGTCAAGGCTAAGATCCAGGATAAGGAAGGAATCCC-CCCGACCAG 2253761 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || ||||| |||||||| | ||| | |||| |||||| Sbjct 2253760 CAAAGACTTATCTTCGCAGGAAAACAGCTGGAAGACGGCCGCACCCTCGCCGACTACAAC 2253701 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | ||| | ||| | ||| |||| ||||| || Sbjct 2253700 ATTCAGAAGGAGTCAACCCTGCATCTTGTTCTCCGTCTGCGTGGTGGGAT 2253651 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| | || || || || || || ||| Sbjct 2252968 ATGCAGATCTTCGTGAAGACACTCACCGGGAAGACGATCACGCTGGAGGTCGAGAGCTCC 2252909 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || ||| || || |||||||| || || || || || ||||| Sbjct 2252908 GACACGATCGACAATGTGAAAGCTAAGATCCAAGACAAGGAGGGGATCCC-CCAGATCAG 2252850 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || || |||| ||| | |||| || | || |||||| Sbjct 2252849 CAGAGGCTCATCTTCGCAGGGAAGCAGCTGGAGGACGGAAGGACCCTTGCTGACTACAAC 2252790 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||| ||||| || ||| | || | || | ||| | || |||||| Sbjct 2252789 ATTCAGAAGGAATCCACCCTCCACCTTGTCCTCCGTCTTCGCGGTGGC 2252742 >seq415 Length=3446356 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || ||||| || || || || | || ||||| || || || || Sbjct 2240986 ATGCAGATATTCGTGAAAACCCTCACTGGGAAAACCATCACTCTCGAGGTTGAGAGCTCA 2240927 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||||| ||||||||||| || || || || || || Sbjct 2240926 GACACCATTGACAATGTCAAGGCCAAAATCCAAGACAAAGAGGGTATCCCTCCAGACCAG 2240867 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||||||||| || | |||||| | ||| || | || || ||| Sbjct 2240866 CAAAGGCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTGCGGACTATAAC 2240807 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | ||| | ||| | ||| | || ||||| || Sbjct 2240806 ATTCAGAAGGAGTCCACCCTCCATCTTGTTCTCCGTCTTCGCGGTGGGAT 2240757 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || |||||| |||| || || || ||||| ||| Sbjct 2241442 ATGCAGATTTTCGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGAGTTCC 2241383 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || || || || || ||||| Sbjct 2241382 GACACTATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAGGGGATTCCTCCAGATCAG 2241323 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | |||||||||||| | || || || ||| || |||| |||||| Sbjct 2241322 CAAAGGCTTATCTTTGCCGGCAAACAACTCGAGGATGGTCGTACCCTTGCCGACTACAAC 2241263 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || |||||||| || |||||| | || | || || ||||| Sbjct 2241262 ATCCAGAAAGAATCGACCTTGCACTTGGTTCTCCGCCTCCGTGGAGGCAT 2241213 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| ||||| ||| | || || | || || ||| || Sbjct 2240758 ATGCAGATTTTTGTGAAAACTCTCACCGGAAAGACAATCACCTTGGAGGTTGAAAGCTCG 2240699 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| |||||||| ||||| || ||||| || || ||||| Sbjct 2240698 GATACAATAGACAACGTCAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCAGATCAG 2240639 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | || || || || | ||||| | ||| | | ||||||||| Sbjct 2240638 CAACGGTTGATCTTTGCAGGTAAGCAGCTTGAAGATGGGCGCACCCTCGCAGATTACAAC 2240579 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || ||| | || |||| | ||| | || |||||||| Sbjct 2240578 ATTCAGAAGGAATCTACCCTGCACCTGGTACTTCGTCTCCGTGGTGGCAT 2240529 >seq1 Length=8502017 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | ||||| || || ||||| | ||| Sbjct 712308 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATTACGCTGGAGGTGGAGTCTTCC 712249 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| ||||| || || |||||||| Sbjct 712248 GACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGGATCCCTCCCGATCAG 712189 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | |||||| || || | || || | ||| | |||| |||||| Sbjct 712188 CAGCGGTTGATCTTCGCCGGGAAGCAGCTTGAGGATGGACGGACGCTCGCCGACTACAAC 712129 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||||||||| || || | ||| | || | ||| | || || ||| Sbjct 712128 ATTCAAAAGGAATCTACGCTCCATCTTGTGCTCCGTCTCCGAGGCGGC 712081 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || ||||| ||| | || || ||||| ||||| ||| Sbjct 7225702 ATGCAGATCTTCGTGAAAACCCTTACCGGAAAGACCATCACCCTTGAGGTGGAGAGTTCC 7225761 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || || ||||| || || || || || || ||||| Sbjct 7225762 GATACCATTGATAACGTCAAGGCTAAGATCCAAGATAAGGAGGGAATTCCCCCAGATCAG 7225821 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||||||||||| | |||||| | ||| | | || || ||| Sbjct 7225822 CAAAGACTGATCTTTGCCGGCAAACAGCTCGAAGACGGCCGCACCCTCGCTGACTATAAC 7225881 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||| | ||| | || | ||| | || ||||| || Sbjct 7225882 ATTCAGAAAGAGTCCACCCTTCATCTTGTCCTCCGTCTCCGTGGTGGAAT 7225931 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || ||| | || || ||||| || ||| || Sbjct 7226158 ATGCAGATCTTTGTGAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTTGAAAGCTCG 7226217 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || || ||||||||||| ||||| || || || || Sbjct 7226218 GACACTATCGATAACGTCAAAGCGAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 7226277 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||| || || | || ||| | ||| | | || |||||| Sbjct 7226278 CAGCGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTACAAC 7226337 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||| ||| | || ||||| | | || ||||||| || Sbjct 7226338 ATCCAGAAGGAGAGCACCCTCCACTTGGTCCTCAGGCTGAGGGGTGGTAT 7226387 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || ||||| || | || ||||| || || || || Sbjct 7226386 ATGCAGATCTTTGTGAAGACCCTCACCGGGAAAACCATCACTCTAGAGGTCGAGAGCTCA 7226445 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||| || || || || ||||| || || ||||| Sbjct 7226446 GACACCATCGACAACGTGAAGGCGAAAATCCAGGATAAGGAGGGCATCCCCCCAGATCAG 7226505 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || || | || ||| | ||| | | ||||||||| Sbjct 7226506 CAGAGATTGATCTTCGCCGGGAAGCAGCTCGAGGACGGGCGCACCCTGGCAGATTACAAC 7226565 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||| ||| | || ||||| | | || ||||||| || Sbjct 7226566 ATCCAGAAGGAGAGCACCCTCCACTTGGTCCTCAGGCTGAGGGGTGGAAT 7226615 >seq3 Length=5347415 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || |||||| | || |||||||||||||| || Sbjct 3172818 ATGCAGATCTTTGTCAAGACTCTAACTGGCAAGACCATAACTCTTGAAGTGGAGAGCTCT 3172759 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || || || ||||| || || || || || Sbjct 3172758 GACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCAG 3172699 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| ||||| || | || || | ||| | ||||||| ||| Sbjct 3172698 CAGAGACTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCCGATTATAAC 3172639 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | || ||||| | || | || ||||| || Sbjct 3172638 ATCCAAAAGGAGTCCACGCTCCACTTGGTCCTCCGCCTCCGCGGTGGTAT 3172589 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || || | || || | || ||||| || Sbjct 3172362 ATGCAGATCTTCGTGAAGACTCTCACTGGGAAAACAATCACCTTGGAGGTGGAGAGCTCG 3172303 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| ||||| |||||||| || || || || || || Sbjct 3172302 GACACCATAGACAACGTGAAGGCAAAGATTCAGGACAAAGAGGGGATCCCCCCGGACCAG 3172243 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| || || ||||||| | ||| | | ||||||||| Sbjct 3172242 CAGAGGCTCATCTTCGCCGGGAAGCAGCTGGAAGATGGCAGGACTTTGGCTGATTACAAC 3172183 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || |||||||| ||| | || | || | ||| |||| || ||| Sbjct 3172182 ATCCAGAAGGAGTCCACCCTTCACCTCGTCCTCCGTCTGCGTGGGGGC 3172135 >seq317 Length=1979591 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | ||||| || || || || | ||| Sbjct 618097 ATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACGATTACGCTAGAGGTAGAGTCCTCC 618156 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| ||||| || || || ||||| Sbjct 618157 GACACTATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAAGGTATCCCTCCGGATCAG 618216 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || |||| |||||| || || | || || | || | |||| |||||| Sbjct 618217 CAACGGTTGATATTCGCCGGGAAGCAGCTTGAGGATGGGCGCACGCTCGCCGACTACAAC 618276 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| ||||| || || | ||| |||| Sbjct 618277 ATTCAGAAGGAATCAACGCTGCATCTGGT 618305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434915583903360