Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq415 96.9 2e-15 seq255 91.5 1e-13 seq3 84.2 2e-11 >seq415 Length=3446356 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || ||||| || |||||| || || |||| ||||||||| | Sbjct 2240530 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATCACCCTTGAGGTCGAAAGCTCG 2240471 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| ||||| || || || || || || || || | || ||| | Sbjct 2240470 GATACGATCGACAAT--GTGAAGGCGAAGATTCAGGATAAGGAGGGAATCCCCCCGGATC 2240413 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| || |||||||| || || | || |||| |||| |||| | || |||| Sbjct 2240412 AGCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGCACCTTGGCGGACTACA 2240353 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 |||||||||| ||||||||| | || || || Sbjct 2240352 ACATCCAAAAGGAGAGCACTCTCCACTTAGT 2240322 >seq255 Length=3424836 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||||||||| || || || |||||| || || | || ||||||||| || Sbjct 2253196 ATGCAGATTTTTGTGAAGACCCTCACCGGGAAAACCATCACTTTGGAGGTCGAAAGCTCC 2253137 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | || || ||||| || ||| |||||| ||||| || || | || ||| | Sbjct 2253136 GACACCATCGACAAT--GTGAAAGCAAAAATCCAGGACAAGGAGGGAATCCCCCCGGATC 2253079 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | || |||||||| || || |||| || | |||| | | | || |||| Sbjct 2253078 AGCAGAGGCTTATCTTTGCCGGGAAGCAGCTGGAGGATGGGCGCACCCTCGCTGACTACA 2253019 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 | ||||| || |||||||| | || ||||| Sbjct 2253018 ATATCCAGAAGGAGAGCACGCTCCACTTGGT 2252988 >seq3 Length=5347415 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || |||||||| || || || ||| || || | || || ||||| || Sbjct 3173046 ATGCAGATCTTCGTGAAAACCCTCACAGGAAAAACAATCACCCTCGAGGTGGAAAGTTCC 3172987 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| || ||| || || ||||| ||||| |||| ||| | Sbjct 3172986 GACACCATTGACAAT--GTTAAAGCCAAGATCCAGGACAAGGAAGGAATTCCCCCGGATC 3172929 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| || | ||||||||||| || ||| | || || | || | | | |||| |||| Sbjct 3172928 AGCAAAGGCTGATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTTGCCGACTACA 3172869 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| ||||| || ||||| ||||| | || | ||||| || Sbjct 3172868 ACATCCAGAAAGAATCGACCTTGCACTTGGTCCTCCGCCTCCGTGGTGG 3172820 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || ||||| ||||| || ||||| | || || || ||| | Sbjct 3172590 ATGCAGATCTTTGTCAAGACTCTAACTGGCAAGACCATTACCCTCGAAGTAGAGAGCTCG 3172531 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || |||| || || ||||| || || ||||| | || ||| | Sbjct 3172530 GACACCATCGACAAC--GTGAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCGGACC 3172473 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| || ||||| ||||| || |||| |||| |||| ||| | || |||| Sbjct 3172472 AGCAGAGGTTGATCTTTGCAGGAAAGCAGCTGGAGGACGGGCGCACATTGGCTGACTACA 3172413 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 ||||||| || ||||||||| | || ||||| Sbjct 3172412 ACATCCAGAAGGAGAGCACTCTCCACTTGGT 3172382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355860153396186