Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 seq255 87.8 2e-12 >seq1 Length=8502017 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || |||||||| || || || || || || || || || || |||| || Sbjct 7226366 ACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCG 7226307 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || ||||| || || ||||||||||| | ||| | || ||||||||| | Sbjct 7226306 AGCTGCTTTCCGGCAAAGATGAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 7226247 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTT 39252 || ||| ||||| | | | || || ||| || || || | ||||| | Sbjct 7226246 ATCTTCGCTTTGACGTTATCGATAGTGTCCGAGCT---TTCAACCTCAAGGGTGATGGTC 7226190 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || || |||||||| ||||| Sbjct 7226189 TTACCCGTGAGGGTCTTCACAAAGATCTGCAT 7226158 >seq255 Length=3424836 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||||||||| || || ||||| || || || || || || | || || Sbjct 2252987 CACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAGTCAGCGAGGGTGCGCCCATCCTC 2253046 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| || || ||||| ||||| | |||||| || | ||| | | ||| |||||| Sbjct 2253047 CAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTG 2253106 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||| | | | | || ||| || || |||| ||||| |||| Sbjct 2253107 GATTTTTGCTTTCACATTGTCGATGGTGTCGGAGCTTTCGACCTCCAAAGTGATGGTTTT 2253166 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || || || || || ||||| || |||||| Sbjct 2253167 CCCGGTGAGGGTCTTCACAAAAATCTGCATC 2253197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429542888224934